Which layover airport has the shortest travel time from Jacksonville to San Diego?

Flights connecting via Atlanta (ATL) have the shortest average one-way travel time: 7h 13m.

Which airport is the most popular layover for flights between Jacksonville and San Diego?

Atlanta (ATL) was the most common stop: 50% of momondo users choosing 1-stop flights on this route connected there.

What airlines fly to San Diego?

American Airlines, Delta and Southwest are the top three most popular airlines that fly to San Diego from Jacksonville according to our data. American Airlines is the first choice among our users, with 46% of people opting to fly with this airline when traveling to San Diego. Keep in mind that there are 7 different airlines that fly to San Diego on a routine basis, so you have a few additional options to choose from.

Which layover airport has the shortest connection time from Jacksonville to San Diego?

Atlanta (ATL) has the shortest average layover time for this route: 0h 54m.

Which layover airport offers the lowest fares from Jacksonville to San Diego?

Flights via New York (JFK) offer the lowest average round-trip price of $577.

How many flights depart from Jacksonville to San Diego on average per week?

As of August 2026, there are 1 flights per week flying from Jacksonville to San Diego. The most common day of the week flights depart is Mon, with 100% of flights taking off on this day.

What is the cheapest airline that flies from Jacksonville to San Diego?

Southwest and Delta are the most popular carriers operating from Jacksonville to San Diego

When did momondo last update prices for flights from Jacksonville Airport to San Diego Airport?

Prices for flights from Jacksonville Airport to San Diego Airport were last updated today.

How many operators does momondo search for flights from Jacksonville Airport to San Diego Airport?

As of August 2026, there are 6 operators available to choose from for flights from Jacksonville Airport to San Diego Airport.

How old do you have to be to fly from Jacksonville Airport to San Diego Airport?

The minimum age a child must be to fly alone is five but airlines that offer an unaccompanied minor (UNMR) service will have their own age restrictions, including rules around flight length, timings, and stopovers. We always recommend checking with the individual airline you are booking with to travel from Jacksonville Airport to San Diego Airport.

What documentation or ID do you need to fly to San Diego Airport?

The travel and health documents you'll need for your trip to San Diego Airport may differ based on your itinerary and personal situation. Typically, you should have several documents on hand, such as a national ID card or driver's license and a passport that is valid for six months after your intended arrival at San Diego Airport. It is always advisable to seek advice from your airline or a trusted third party, such as IATA.

$116 Cheap Flights from Jacksonville to San Diego in 2026

Discover deals from 900+ travel sites with momondo.

Find the cheapest flights from Jacksonville to San Diego

Round-trip

One-way

Last minute

Direct

Cheap round-trip flights

Enter your travel dates to find the best prices.

9:30 am - 11:44 am-

5h 14mnonstop

12:29 pm - 8:32 pm-

5h 03mnonstop

$188Breeze Airways

Wed, Aug 26 - Sat, Aug 29

9:30 am - 11:44 am-

5h 14mnonstop

12:29 pm - 8:32 pm-

5h 03mnonstop

$193Breeze Airways

Wed, Aug 26 - Sat, Aug 29

9:30 am - 11:44 am-

5h 14mnonstop

4:36 pm - 6:10 pm-

22h 34m

$221Multiple Airlines

Sat, Aug 22 - Wed, Aug 26

9:30 am - 11:44 am-

5h 14mnonstop

9:03 am - 7:01 pm-

30h 58m

$226Multiple Airlines

Wed, Sep 2 - Sat, Sep 12

6:00 am - 10:07 am-

7h 07m

10:20 pm - 10:18 am-

8h 58m

$291American Airlines

Wed, Aug 26 - Sat, Aug 29

5:09 am - 11:06 am-

8h 57m

10:00 am - 9:05 pm-

8h 05m

$291American Airlines

Wed, Oct 28 - Sat, Oct 31

6:59 pm - 11:00 pm-

7h 01m

2:00 pm - 11:58 pm-

6h 58m

$291Delta

Mon, Aug 31 - Tue, Sep 8

12:59 pm - 5:05 pm-

7h 06m

10:17 pm - 11:03 am-

9h 46m

$291Delta

Tue, Sep 1 - Mon, Sep 7

1:30 pm - 6:30 pm-

8h 00m

11:20 am - 11:20 pm-

9h 00m

$296Southwest

Sat, Sep 26 - Mon, Oct 5

4:10 pm - 10:55 pm-

9h 45m

11:20 am - 11:20 pm-

9h 00m

$301Southwest

Sat, Sep 26 - Mon, Oct 5

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Breeze Airways flights from Jacksonville to San Diego

Our best Breeze Airways deals on Jacksonville to San Diego flight tickets

Breeze Airways

Aug 26

JAX9:30 amJacksonville

5h 14m

SAN11:44 amSan Diego

Aug 29

SAN12:29 pmSan Diego

5h 03m

JAX8:32 pmJacksonville

$188

Breeze Airways

Aug 26

JAX9:30 amJacksonville

5h 14m

SAN11:44 amSan Diego

Aug 29

SAN12:29 pmSan Diego

5h 03m

JAX8:32 pmJacksonville

$198

Breeze Airways

Aug 22

JAX9:30 amJacksonville

5h 14m

SAN11:44 amSan Diego

Aug 29

SAN12:29 pmSan Diego

5h 03m

JAX8:32 pmJacksonville

$199

Delta flights from Jacksonville to San Diego

Our best Delta deals on Jacksonville to San Diego flight tickets

Delta

Sep 14

JAX6:59 pmJacksonville

6h 55m

1 stop

SAN10:54 pmSan Diego

Sep 19

SAN6:20 amSan Diego

8h 34m

1 stop

JAX5:54 pmJacksonville

$291

Delta

Nov 26

JAX3:00 pmJacksonville

8h 17m

1 stop

SAN8:17 pmSan Diego

Dec 5

SAN8:00 amSan Diego

7h 03m

1 stop

JAX6:03 pmJacksonville

$315

Delta

Aug 27

JAX2:29 pmJacksonville

8h 06m

1 stop

SAN7:35 pmSan Diego

Sep 5

SAN12:45 pmSan Diego

8h 10m

1 stop

JAX11:55 pmJacksonville

$320

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

Quickest round-trip

JacksonvilleSan Diego

JAX - SAN

JAXSAN

Jacksonville

Wed 8/26

9:30 am-11:44 am

Nonstop5h 14m

San Diego

Sat 8/29

12:29 pm-8:32 pm

Nonstop5h 03m

$188

JacksonvilleSan Diego

JAX - SAN

JAXSAN

Jacksonville

Wed 8/26

9:30 am-11:44 am

Nonstop5h 14m

San Diego

Sat 8/29

12:29 pm-8:32 pm

Nonstop5h 03m

$193

JacksonvilleSan Diego

JAX - SAN

JAXSAN

Jacksonville

Sat 8/22

9:30 am-11:44 am

Nonstop5h 14m

San Diego

Wed 8/26

4:36 pm-6:10 pm

2 stops22h 34m

$221

JacksonvilleSan Diego

JAX - SAN

JAXSAN

Jacksonville

Wed 9/2

9:30 am-11:44 am

Nonstop5h 14m

San Diego

Sat 9/12

9:03 am-7:01 pm

2 stops30h 58m

$226

JacksonvilleSan Diego

JAX - SAN

JAXSAN

Jacksonville

Wed 8/26

6:00 am-10:07 am

1 stop7h 07m

San Diego

Sat 8/29

10:20 pm-10:18 am

1 stop8h 58m

$291

JacksonvilleSan Diego

JAX - SAN

JAXSAN

Jacksonville

Wed 10/28

5:09 am-11:06 am

1 stop8h 57m

San Diego

Sat 10/31

10:00 am-9:05 pm

1 stop8h 05m

$291

JacksonvilleSan Diego

JAX - SAN

JAXSAN

Jacksonville

Mon 8/31

6:59 pm-11:00 pm

1 stop7h 01m

San Diego

Tue 9/8

2:00 pm-11:58 pm

1 stop6h 58m

$291

JacksonvilleSan Diego

JAX - SAN

JAXSAN

Jacksonville

Tue 9/1

12:59 pm-5:05 pm

1 stop7h 06m

San Diego

Mon 9/7

10:17 pm-11:03 am

1 stop9h 46m

$291

JacksonvilleSan Diego

JAX - SAN

JAXSAN

Jacksonville

Sat 9/26

1:30 pm-6:30 pm

1 stop8h 00m

San Diego

Mon 10/5

11:20 am-11:20 pm

2 stops9h 00m

$296

JacksonvilleSan Diego

JAX - SAN

JAXSAN

Jacksonville

Sat 9/26

4:10 pm-10:55 pm

2 stops9h 45m

San Diego

Mon 10/5

11:20 am-11:20 pm

2 stops9h 00m

$301

Flights are sorted by cheapest round-trip flights first.

Showing 1-10 of 20 resultsSorted by cheapest first

How to get the cheapest flight ticket from Jacksonville to San Diego

Look no further. We've gone through all the searches for this route on momondo so you have the important information and insights to find the cheapest flight ticket for your trip

Prices

Airlines

Layovers

Other information

What is the typical price of a round-trip flight between Jacksonville and San Diego?

Prices are currently low for flights on this route.

Typical prices usually range from $208 to $455.
The lowest price recently found on this route was $188.

What is the cheapest month to fly to San Diego?

If you are unable to visit San Diego during the month of August, then departing from Jacksonville during the month May is also very affordable. Most momondo users find prices during this month for around $318.

What is the cheapest day to depart on your flight to San Diego?

The cheapest day to depart from Jacksonville to San Diego is on a Saturday. Travelers who choose to depart for San Diego on a Saturday will often find tickets for as low as $298. If your travel schedule is flexible, try to avoid departing on a Tuesday because tickets tend to average around $437. These prices are subject to change though, so be sure to set up a Price Alert for flights to San Diego.

What is the cheapest Jacksonville to San Diego flight route?

Fly from Jacksonville to San Diego for the best Jacksonville - San Diego flight prices

How far in advance should I book a flight from Jacksonville to San Diego?

You are more likely to see cheaper flights to San Diego from Jacksonville when booking weeks ahead of your departure date. In general, you can expect to find flights to San Diego for around $460 when searching weeks out. However, flight prices might be lower outside of this timeframe. For example, people recently found flights to San Diego from Jacksonville for as low as $326 on momondo.

What cabin class options are available on Jacksonville to San Diego flights?

There are 2 cabin classes available to choose from on Jacksonville to San Diego flights. Cabin price and availability will vary by airline so perform a search above to find the right deals for you.

Can stopping save me money on Jacksonville to San Diego flights?

You could potentially save up to 9% on your flight if you consider stops on a Jacksonville to San Diego flight.

How have Jacksonville to San Diego flight prices changed over time?

As of August 2026, prices for Jacksonville to San Diego flights are approximately 11% cheaper when compared to flights at the same time last year.

When to book flights from Jacksonville to San Diego

Are you open to changing your travel dates? Check out the ideal times to fly from Jacksonville to San Diego according to our flight data. Find out which month and days have the cheapest flights.

Estimated round-trip price

Cheap Jacksonville to San Diego (JAX to SAN) flight deals and tips

Find info about flight duration, direct flights, and airports for your flight from Jacksonville to San Diego

Best Price Found	$184
Fastest flight time	5h 14m
Direct flights	Thu and Sun
Airports in San Diego	1 airport

The best one-way flight to San Diego from Jacksonville in the past 72 hours is $184. The best round-trip flight deal from Jacksonville to San Diego found on momondo in the last 72 hours is $298.

The fastest flight from Jacksonville to San Diego takes 5h 14m

Direct flights go from Jacksonville to San Diego on Thursday and Sunday. The only airline offering direct flights is Breeze Airways.

There is 1 airport in San Diego. From Jacksonville there are direct flights to San Diego (SAN).

Search flight deals

Frequently asked questions about flying from Jacksonville to San Diego

How far is Jacksonville to San Diego by plane?
A flight from Jacksonville to San Diego will travel around 2086.3 mi. A reasonable flight in good conditions will take 5h 14m.
When did momondo last update prices for flights from Jacksonville Airport to San Diego Airport?
Prices for flights from Jacksonville Airport to San Diego Airport were last updated today.
How many operators does momondo search for flights from Jacksonville Airport to San Diego Airport?
As of August 2026, there are 6 operators available to choose from for flights from Jacksonville Airport to San Diego Airport.
How old do you have to be to fly from Jacksonville Airport to San Diego Airport?
The minimum age a child must be to fly alone is five but airlines that offer an unaccompanied minor (UNMR) service will have their own age restrictions, including rules around flight length, timings, and stopovers. We always recommend checking with the individual airline you are booking with to travel from Jacksonville Airport to San Diego Airport.
What documentation or ID do you need to fly to San Diego Airport?
The travel and health documents you'll need for your trip to San Diego Airport may differ based on your itinerary and personal situation. Typically, you should have several documents on hand, such as a national ID card or driver's license and a passport that is valid for six months after your intended arrival at San Diego Airport. It is always advisable to seek advice from your airline or a trusted third party, such as IATA.
What is the most popular plane model from Jacksonville to San Diego?
Based on momondo bookings for flights between Jacksonville and San Diego, the leading plane model is Airbus A220-300, making up 100.00% of the total bookings.
What is the most popular airline from Jacksonville to San Diego?
momondo data reveals that the most frequently booked airline on the route from Jacksonville to San Diego is American Airlines, representing 28% of all bookings. The subsequent popular airlines are Southwest at 21%, Breeze Airways at 21%, and Delta at 16%.

Best airlines flying from Jacksonville to San Diego

Compare and see reviews for airlines that fly from Jacksonville to San Diego with momondo

Airline	Rating	Free Cancellation	Price
Breeze Airways	PriceFrom $116	Free Cancellation	Rating 8.2 304 reviews	Search Breeze Airways flights
JetBlue	PriceFrom $138	Free Cancellation	Rating 7.2 3,025 reviews	Search JetBlue flights
Delta	PriceFrom $175	Free Cancellation	Rating 7.8 8,481 reviews	Search Delta flights
American Airlines	PriceFrom $324	Free Cancellation	Rating 7.1 11,850 reviews	Search American Airlines flights
United Airlines	PriceFrom $324	Free Cancellation	Rating 7.4 10,059 reviews	Search United Airlines flights
Southwest	PriceFrom $339	Free Cancellation	Rating 8.0 4,222 reviews	Search Southwest flights

Southwest Flights From Jacksonville to San Diego
Southwest is one of the most popular airlines flying from Jacksonville to San Diego, operating 1 flight/week on average for this route. A good Southwest flight deal for Jacksonville to San Diego starts from $339 round-trip, up to an average price of $554. Our users have rated Southwest at 8.0/10.

Chula Vista

Coronado

El Cajon

National City

Julian

La Mesa

Poway

San Ysidro

Imperial Beach

Borrego Springs

Santee

Lemon Grove

Alpine

Why use momondo?

Why should I use momondo to find a flight deal from Jacksonville to San Diego?

momondo collates all your flight options in one place and lets you filter them to find the perfect flight from Jacksonville to San Diego. momondo saves you time and could save you money on your trip.

Can I find flights from Jacksonville to San Diego with flexible booking policies on momondo?

Yes. momondo enables you to select and highlight flights to San Diego from Jacksonville with this policy.

How can momondo help me find flights from Jacksonville to San Diego?

Once you have performed a search in the form on the page, momondo provides useful filters and insights. We can show you the cheapest days and times to fly as well as help filter your options to help you make an informed choice when booking flights to San Diego from Jacksonville.

I’m not ready to book a flight from Jacksonville to San Diego right now. Can momondo alert me if prices change?

If you are simply researching potential flights to San Diego, momondo offers a useful price alert feature which will track prices for flights to San Diego from Jacksonville and alert you when they change.

An easier way to manage your San Diego trip

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Cheap flights from Jacksonville to San Diego from $122

This is the cheapest one-way flight price found by a momondo user in the last 72 hours by searching for a flight from Jacksonville to San Diego departing on 10/15. Fares may change, and may not be available for all flights or travel dates. Click the price to refresh the search for this deal.

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Breeze Airways flights from Jacksonville to San Diego

Our best Breeze Airways deals on Jacksonville to San Diego flight tickets

Delta flights from Jacksonville to San Diego

Our best Delta deals on Jacksonville to San Diego flight tickets

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Use the filters below to find and compare flights from Jacksonville to San Diego that are best for you.

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How to get the cheapest flight ticket from Jacksonville to San Diego

What is the typical price of a round-trip flight between Jacksonville and San Diego?

What is the cheapest month to fly to San Diego?

What is the cheapest day to depart on your flight to San Diego?

What is the cheapest Jacksonville to San Diego flight route?

How far in advance should I book a flight from Jacksonville to San Diego?

What cabin class options are available on Jacksonville to San Diego flights?

Can stopping save me money on Jacksonville to San Diego flights?

How have Jacksonville to San Diego flight prices changed over time?

What is the cheapest airline that flies from Jacksonville to San Diego?

What airlines fly to San Diego?

Which airport is the most popular layover for flights between Jacksonville and San Diego?

Which layover airport offers the lowest fares from Jacksonville to San Diego?

Which layover airport has the shortest travel time from Jacksonville to San Diego?

Which layover airport has the shortest connection time from Jacksonville to San Diego?

How many flights depart from Jacksonville to San Diego on average per week?

When to book flights from Jacksonville to San Diego

Cheap Jacksonville to San Diego (JAX to SAN) flight deals and tips

Best Price Found

Fastest flight time

Direct flights

Airports in San Diego

Frequently asked questions about flying from Jacksonville to San Diego

Best airlines flying from Jacksonville to San Diego

Compare and see reviews for airlines that fly from Jacksonville to San Diego with momondo

Traveling to a place near San Diego?

Why use momondo?

An easier way to manage your San Diego trip

We make it super easy to schedule, organize and travel with friends or family. Trips is free — and available to use no matter where you book.

Get notified when prices go down

Daily price changes in your inbox - only with Price Alerts.

Find better results for your trip to the United States

Airports servicing California

Fly your favorite airline to San Diego

Airlines are sorted and displayed according to clicks in the past 7 days on momondo

Cabin classes currently available on flights to San Diego

List of cabin classes available on flights landing in San Diego. Availability may vary depending on flight origin and airline.

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