Latest deals
Insights
FAQs
Reviews
Price Alerts

Cheap flights from San Diego to Puerto Rico from $168

1 adult
1 adult, Economy, 0 bags

Discover deals from 900+ travel sites with momondo.

Find the cheapest flights from San Diego to Puerto Rico

Cheap round-trip flights

Enter your travel dates to find the best prices.
JetBlue Logo
9:40 pm - 11:26 amSAN  San Diego-SJU San Juan Luis Munoz Marin Intl
10h 46m1 stop New York John F Kennedy Intl
JetBlue Logo
11:20 am - 8:22 pmSJU  San Juan Luis Munoz Marin Intl-SAN San Diego
13h 02m1 stop New York John F Kennedy Intl
$382JetBlue
Fri, Oct 30 - Fri, Nov 6
JetBlue Logo
9:40 pm - 11:26 amSAN  San Diego-SJU San Juan Luis Munoz Marin Intl
10h 46m1 stop New York John F Kennedy Intl
JetBlue Logo
11:20 am - 8:25 pmSJU  San Juan Luis Munoz Marin Intl-SAN San Diego
13h 05m1 stop New York John F Kennedy Intl
$382JetBlue
Fri, Oct 30 - Wed, Nov 4
Frontier Logo
9:34 am - 2:09 amSAN  San Diego-SJU San Juan Luis Munoz Marin Intl
13h 35m2 stops Dallas/Fort Worth Miami
Frontier Logo
3:59 pm - 7:47 pmSJU  San Juan Luis Munoz Marin Intl-SAN San Diego
31h 48m2 stops Atlanta Hartsfield-Jackson Las Vegas Harry Reid Intl
$383Frontier
Mon, Oct 26 - Wed, Nov 4
Frontier Logo
8:32 pm - 11:44 pmSAN  San Diego-SJU San Juan Luis Munoz Marin Intl
24h 12m2 stops Las Vegas Harry Reid Intl Atlanta Hartsfield-Jackson
Frontier Logo
3:59 pm - 3:58 pmSJU  San Juan Luis Munoz Marin Intl-SAN San Diego
27h 59m2 stops Atlanta Hartsfield-Jackson Denver Intl
$394Frontier
Fri, Oct 30 - Tue, Nov 3
American Airlines Logo
10:31 pm - 2:51 pmSAN  San Diego-SJU San Juan Luis Munoz Marin Intl
12h 20m1 stop Chicago O'Hare Intl
American Airlines Logo
7:03 am - 7:36 pmSJU  San Juan Luis Munoz Marin Intl-SAN San Diego
16h 33m1 stop Chicago O'Hare Intl
$439American Airlines
Sat, Jan 9 - Sat, Jan 16
American Airlines Logo
10:31 pm - 2:51 pmSAN  San Diego-SJU San Juan Luis Munoz Marin Intl
12h 20m1 stop Chicago O'Hare Intl
American Airlines Logo
7:22 am - 3:44 pmSJU  San Juan Luis Munoz Marin Intl-SAN San Diego
12h 22m2 stops Miami Phoenix Sky Harbor Intl
$439American Airlines
Sat, Jan 9 - Sat, Jan 16
Delta Logo
10:25 pm - 2:49 pmSAN  San Diego-SJU San Juan Luis Munoz Marin Intl
13h 24m1 stop Atlanta Hartsfield-Jackson
Delta Logo
2:15 pm - 11:46 pmSJU  San Juan Luis Munoz Marin Intl-SAN San Diego
13h 31m1 stop New York John F Kennedy Intl
$445Delta
Sat, Oct 31 - Wed, Nov 4
Delta Logo
10:25 pm - 2:49 pmSAN  San Diego-SJU San Juan Luis Munoz Marin Intl
13h 24m1 stop Atlanta Hartsfield-Jackson
Delta Logo
3:59 pm - 10:02 pmSJU  San Juan Luis Munoz Marin Intl-SAN San Diego
10h 03m1 stop Atlanta Hartsfield-Jackson
$445Delta
Sat, Oct 31 - Fri, Nov 6
Southwest Logo
10:35 pm - 11:50 amSAN  San Diego-SJU San Juan Luis Munoz Marin Intl
9h 15m1 stop Orlando
Southwest Logo
6:05 am - 12:20 pmSJU  San Juan Luis Munoz Marin Intl-SAN San Diego
10h 15m1 stop Tampa
$446Southwest
Sun, Nov 8 - Fri, Nov 13
Southwest Logo
6:50 am - 8:35 pmSAN  San Diego-SJU San Juan Luis Munoz Marin Intl
10h 45m2 stops Nashville Intl Tampa
Southwest Logo
12:40 pm - 8:00 pmSJU  San Juan Luis Munoz Marin Intl-SAN San Diego
11h 20m1 stop Orlando
$446Southwest
Tue, Oct 27 - Mon, Nov 2

Save money when you book flights with momondo

Big names and deals

Big names and deals

Search 100s of travel sites to compare prices.

Filter for what you want

Filter for what you want

Free Wi-Fi? Stopover? Instantly customize your results.

Trusted and free

Trusted and free

We’re completely free to use - no hidden charges or fees.

Price Alerts

Price Alerts

Not ready to book? to track prices.
Search flight deals

JetBlue flights from San Diego to Puerto Rico

Our best JetBlue deals on San Diego to Puerto Rico flight tickets
JetBlue
Oct 30
SAN9:40 pmSan Diego
10h 46m
1 stop
SJU11:26 amSan Juan Luis Munoz Marin Intl
Nov 6
SJU11:20 amSan Juan Luis Munoz Marin Intl
13h 02m
1 stop
SAN8:22 pmSan Diego
$382
JetBlue
Oct 26
SAN9:40 pmSan Diego
13h 06m
1 stop
SJU1:46 pmSan Juan Luis Munoz Marin Intl
Nov 4
SJU11:20 amSan Juan Luis Munoz Marin Intl
13h 05m
1 stop
SAN8:25 pmSan Diego
$383
JetBlue
Nov 10
SAN9:40 pmSan Diego
13h 00m
1 stop
SJU2:40 pmSan Juan Luis Munoz Marin Intl
Nov 17
SJU11:20 amSan Juan Luis Munoz Marin Intl
13h 02m
1 stop
SAN8:22 pmSan Diego
$385

Frontier flights from San Diego to Puerto Rico

Our best Frontier deals on San Diego to Puerto Rico flight tickets
Frontier
Oct 30
SAN8:32 pmSan Diego
24h 12m
2 stops
SJU11:44 pmSan Juan Luis Munoz Marin Intl
Nov 2
SJU7:26 pmSan Juan Luis Munoz Marin Intl
24h 32m
2 stops
SAN3:58 pmSan Diego
$394
Frontier
Nov 5
SAN6:25 amSan Diego
26h 11m
2 stops
SJU12:36 pmSan Juan Luis Munoz Marin Intl
Nov 10
SJU3:59 pmSan Juan Luis Munoz Marin Intl
27h 59m
2 stops
SAN3:58 pmSan Diego
$412
Frontier
Oct 31
SAN6:25 amSan Diego
24h 50m
2 stops
SJU10:15 amSan Juan Luis Munoz Marin Intl
Nov 5
SJU7:23 amSan Juan Luis Munoz Marin Intl
20h 34m
2 stops
SAN11:57 pmSan Diego
$416

momondo Fare Finder

 
Use the filters below to find and compare flights from San Diego to Puerto Rico that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

San DiegoSan Juan

SAN San Diego - SJU San Juan Luis Munoz Marin Intl

SANSJU

San Diego

Fri 10/30

9:40 pm-11:26 am

1 stop10h 46m

San Juan Luis Munoz Marin Intl

Fri 11/6

11:20 am-8:22 pm

1 stop13h 02m

$382

San DiegoSan Juan

SAN San Diego - SJU San Juan Luis Munoz Marin Intl

SANSJU

San Diego

Fri 10/30

9:40 pm-11:26 am

1 stop10h 46m

San Juan Luis Munoz Marin Intl

Wed 11/4

11:20 am-8:25 pm

1 stop13h 05m

$382

San DiegoSan Juan

SAN San Diego - SJU San Juan Luis Munoz Marin Intl

SANSJU

San Diego

Mon 10/26

9:34 am-2:09 am

2 stops13h 35m

San Juan Luis Munoz Marin Intl

Wed 11/4

3:59 pm-7:47 pm

2 stops31h 48m

$383

San DiegoSan Juan

SAN San Diego - SJU San Juan Luis Munoz Marin Intl

SANSJU

San Diego

Fri 10/30

8:32 pm-11:44 pm

2 stops24h 12m

San Juan Luis Munoz Marin Intl

Tue 11/3

3:59 pm-3:58 pm

2 stops27h 59m

$394

San DiegoSan Juan

SAN San Diego - SJU San Juan Luis Munoz Marin Intl

SANSJU

San Diego

Sat 1/9

10:31 pm-2:51 pm

1 stop12h 20m

San Juan Luis Munoz Marin Intl

Sat 1/16

7:03 am-7:36 pm

1 stop16h 33m

$439

San DiegoSan Juan

SAN San Diego - SJU San Juan Luis Munoz Marin Intl

SANSJU

San Diego

Sat 1/9

10:31 pm-2:51 pm

1 stop12h 20m

San Juan Luis Munoz Marin Intl

Sat 1/16

7:22 am-3:44 pm

2 stops12h 22m

$439

San DiegoSan Juan

SAN San Diego - SJU San Juan Luis Munoz Marin Intl

SANSJU

San Diego

Sat 10/31

10:25 pm-2:49 pm

1 stop13h 24m

San Juan Luis Munoz Marin Intl

Wed 11/4

2:15 pm-11:46 pm

1 stop13h 31m

$445

San DiegoSan Juan

SAN San Diego - SJU San Juan Luis Munoz Marin Intl

SANSJU

San Diego

Sat 10/31

10:25 pm-2:49 pm

1 stop13h 24m

San Juan Luis Munoz Marin Intl

Fri 11/6

3:59 pm-10:02 pm

1 stop10h 03m

$445
Quickest round-trip

San DiegoSan Juan

SAN San Diego - SJU San Juan Luis Munoz Marin Intl

SANSJU

San Diego

Sun 11/8

10:35 pm-11:50 am

1 stop9h 15m

San Juan Luis Munoz Marin Intl

Fri 11/13

6:05 am-12:20 pm

1 stop10h 15m

$446

San DiegoSan Juan

SAN San Diego - SJU San Juan Luis Munoz Marin Intl

SANSJU

San Diego

Tue 10/27

6:50 am-8:35 pm

2 stops10h 45m

San Juan Luis Munoz Marin Intl

Mon 11/2

12:40 pm-8:00 pm

1 stop11h 20m

$446

Flights are sorted by cheapest round-trip flights first.

Showing 1-10 of 20 resultsSorted by cheapest first
1
2

See travel insights to Puerto Rico from

How to get the cheapest flight ticket from San Diego to Puerto Rico

Look no further. We've gone through all the searches for this route on momondo so you have the important information and insights to find the cheapest flight ticket for your trip

What is the cheapest month to fly to Puerto Rico?

If you don’t want to visit Puerto Rico in September, then you should wait until May to fly from San Diego, when ticket prices are also cheap, with an average price of $429.

What is the cheapest San Diego to Puerto Rico flight route?

Fly from San Diego to San Juan Luis Munoz Marin Intl for the best San Diego - Puerto Rico flight prices

How far in advance should I book a flight from San Diego to Puerto Rico?

You are more likely to see cheaper flights to Puerto Rico from San Diego when booking weeks ahead of your departure date. In general, you can expect to find flights to Puerto Rico for around $514 when searching weeks out. However, flight prices might be lower outside of this timeframe. For example, people recently found flights to Puerto Rico from San Diego for as low as $450 on momondo.

What cabin class options are available on San Diego to Puerto Rico flights?

There is only 1 cabin class available to choose from on San Diego to Puerto Rico flights. Cabin price and availability will vary by airline so perform a search above to find the right deals for you.

Can stopping save me money on San Diego to Puerto Rico flights?

You could potentially save up to 9% on your flight if you consider stops on a San Diego to Puerto Rico flight.

Cheap San Diego to Puerto Rico flight deals and tips

Find info about flight duration, direct flights, and airports for your flight from San Diego to Puerto Rico

Best Price Found

$168

Fastest flight time

9h 30m

Direct flights

None
The best one-way flight to Puerto Rico from San Diego in the past 72 hours is $168. The best round-trip flight deal from San Diego to Puerto Rico found on momondo in the last 72 hours is $382.
The fastest flight from San Diego to Puerto Rico takes 9h 30m
There are no direct flights from San Diego to Puerto Rico. There are no popular flight routes from San Diego to Puerto Rico.
Search flight deals

Frequently asked questions about flying from San Diego to Puerto Rico

  • When did momondo last update prices for flights from San Diego Airport to Puerto Rico?

    Prices for flights from San Diego Airport to Puerto Rico refresh daily.

  • How many operators does momondo search for flights from San Diego Airport to Puerto Rico?

  • How old do you have to be to fly from San Diego Airport to Puerto Rico?

    Although the minimum age for a child to fly alone is five, airlines that offer an unaccompanied minor (UMNR) service may have their own age limits, which could be impacted by factors such as flight length, timing, and layovers. It is recommended that you verify with the airline you are booking with for travel from San Diego Airport to Puerto Rico.

  • What documentation or ID do you need to fly to Puerto Rico?

    The travel and health documents required for your trip to Puerto Rico can vary based on your itinerary and personal situation. As a rule, consider having multiple documents such as a national ID card or driver’s license, and a passport valid for six-months after you plan to arrive at Puerto Rico. We always recommend checking with your airline or a trusted third party such as IATA to get advice.

  • What is the most popular plane model from San Diego to Puerto Rico?

Best airlines flying from San Diego to Puerto Rico

Compare and see reviews for airlines that fly from San Diego to Puerto Rico with momondo
Airline
Rating
Free Cancellation
Price
FrontierPriceFrom $138Free CancellationRating
5.6
2,572 reviews
Search Frontier flights
DeltaPriceFrom $158Free CancellationRating
7.8
8,605 reviews
Search Delta flights
American AirlinesPriceFrom $295Free CancellationRating
7.0
12,099 reviews
Search American Airlines flights
United AirlinesPriceFrom $295Free CancellationRating
7.4
10,242 reviews
Search United Airlines flights
JetBluePriceFrom $350Free CancellationRating
7.1
3,041 reviews
Search JetBlue flights
SouthwestPriceFrom $420Free CancellationRating
8.0
4,201 reviews
Search Southwest flights
Alaska AirlinesPriceFrom $523Free CancellationRating
7.9
12,980 reviews
Search Alaska Airlines flights

Why use momondo?

Why should I use momondo to find a flight deal from San Diego to Puerto Rico?

Finding the right flight to Puerto Rico from San Diego is quick and easy when you have a range of options in front of you, from reputable agents and recognisable airlines. Options that can then be filtered down to find the best fit. That is what momondo does. We make finding flights to Puerto Rico quick and easy, saving you time and money.

Can I find flights from San Diego to Puerto Rico with flexible booking policies on momondo?

Yes. momondo allows you to filter the results for San Diego to Puerto Rico flights to just show those with flexible booking policies.

How can momondo help me find flights from San Diego to Puerto Rico?

Once you have performed a search in the form on the page, momondo provides useful filters and insights. We can show you the cheapest days and times to fly as well as help filter your options to help you make an informed choice when booking flights to Puerto Rico from San Diego.

I’m not ready to book a flight from San Diego to Puerto Rico right now. Can momondo alert me if prices change?

Price alerts on flights to Puerto Rico from San Diego are quick and easy to set up on momondo. Simply perform a search and select the price alert feature. It is as simple as that.

An easier way to manage your Puerto Rico trip

We make it super easy to schedule, organize and travel with friends or family. Trips is free — and available to use no matter where you book.
Start using Trips
Find my bookings

Get notified when prices go down

Daily price changes in your inbox - only with Price Alerts.
1 adult
Tue 10/27
Tue 11/3
By creating a price alert you accept our terms of use and privacy policy.

Find better results for your trip to Puerto Rico

Popular cities in Puerto Rico

Flights to San Juanfrom $114
Flights to Aguadillafrom $248
Flights to Poncefrom $242
Flights to Viequesfrom $517
Flights to Culebrafrom $393
Flights to Mayagüezfrom $414