Cheap flights from San Diego to Juneau from $321

This is the cheapest one-way flight price found by a momondo user in the last 72 hours by searching for a flight from San Diego to Juneau departing on 5/20. Fares may change, and may not be available for all flights or travel dates. Click the price to refresh the search for this deal.
1 adult
0 bags

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Cheap round-trip flights

Enter your travel dates to find the best prices.
Alaska Airlines Logo
8:42 pm - 9:34 pm
SAN
-
JNU
25h 52m2 stops
Alaska Airlines Logo
9:47 am - 10:07 am
JNU
-
SAN
23h 20m3 stops
$411Alaska Airlines
Fri, Jan 9 - Tue, Jan 13
Alaska Airlines Logo
6:15 am - 1:24 pm
SAN
-
JNU
8h 09m1 stop
Alaska Airlines Logo
7:20 am - 8:58 pm
JNU
-
SAN
12h 38m2 stops
$416Alaska Airlines
Fri, Jan 9 - Tue, Jan 13
Alaska Airlines Logo
11:49 am - 10:52 pm
SAN
-
JNU
12h 03m1 stop
Alaska Airlines Logo
7:00 am - 3:29 pm
JNU
-
SAN
7h 29m1 stop
$421Alaska Airlines
Fri, Jan 9 - Tue, Jan 13
Alaska Airlines Logo
7:03 pm - 9:34 pm
SAN
-
JNU
27h 31m2 stops
Alaska Airlines Logo
9:47 am - 5:20 pm
JNU
-
SAN
30h 33m3 stops
$426Alaska Airlines
Fri, Jan 9 - Tue, Jan 13
Alaska Airlines Logo
9:37 am - 8:03 pm
SAN
-
JNU
11h 26m3 stops
Alaska Airlines Logo
9:47 am - 8:58 pm
JNU
-
SAN
10h 11m3 stops
$430Alaska Airlines
Fri, Jan 9 - Tue, Jan 13
Alaska Airlines Logo
6:15 am - 1:24 pm
SAN
-
JNU
8h 09m1 stop
Alaska Airlines Logo
7:20 am - 8:58 pm
JNU
-
SAN
12h 38m2 stops
$431Alaska Airlines
Fri, Jan 9 - Tue, Jan 13
Alaska Airlines Logo
11:49 am - 10:52 pm
SAN
-
JNU
12h 03m1 stop
Alaska Airlines Logo
7:00 am - 3:29 pm
JNU
-
SAN
7h 29m1 stop
$436Alaska Airlines
Fri, Jan 9 - Tue, Jan 13
Alaska Airlines Logo
9:15 pm - 8:40 am
SAN
-
JNU
12h 25m2 stops
Alaska Airlines Logo
7:20 am - 11:09 pm
JNU
-
SAN
14h 49m1 stop
$441Alaska Airlines
Mon, Jan 5 - Mon, Jan 12
Alaska Airlines Logo
6:59 pm - 1:08 am
SAN
-
JNU
7h 09m1 stop
Alaska Airlines Logo
7:20 am - 7:19 pm
JNU
-
SAN
10h 59m1 stop
$756Alaska Airlines
Mon, Jan 5 - Mon, Jan 12
Alaska Airlines Logo
9:41 am - 7:55 pm
SAN
-
JNU
11h 14m3 stops
Alaska Airlines Logo
9:47 am - 11:09 pm
JNU
-
SAN
12h 22m3 stops
$1,887Alaska Airlines
Mon, Jan 5 - Mon, Jan 12

Alaska Airlines flights from San Diego to Juneau

Our best Alaska Airlines deals on San Diego to Juneau flight tickets
Alaska Airlines
Jan 9
SAN8:42 pmSan Diego
25h 52m
2 stops
JNU9:34 pmJuneau Intl
Jan 13
JNU9:47 amJuneau Intl
23h 20m
3 stops
SAN10:07 amSan Diego
Alaska Airlines
Jan 9
SAN6:15 amSan Diego
8h 09m
1 stop
JNU1:24 pmJuneau Intl
Jan 13
JNU7:20 amJuneau Intl
12h 38m
2 stops
SAN8:58 pmSan Diego
Alaska Airlines
Jan 9
SAN11:49 amSan Diego
12h 03m
1 stop
JNU10:52 pmJuneau Intl
Jan 13
JNU7:00 amJuneau Intl
7h 29m
1 stop
SAN3:29 pmSan Diego

momondo Fare Finder

 
Customize your flight search to find flights from San Diego to Juneau that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, momondo users made 832,500 searches. Data last updated December 4, 2025.
Use the filters below to find and compare flights from San Diego to Juneau that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

San DiegoJuneau

SAN - JNU

SANJNU

San Diego

Fri 1/9

8:42 pm-9:34 pm

2 stops25h 52m

Juneau Intl

Tue 1/13

9:47 am-10:07 am

3 stops23h 20m

$411

San DiegoJuneau

SAN - JNU

SANJNU

San Diego

Fri 1/9

6:15 am-1:24 pm

1 stop8h 09m

Juneau Intl

Tue 1/13

7:20 am-8:58 pm

2 stops12h 38m

$416

San DiegoJuneau

SAN - JNU

SANJNU

San Diego

Fri 1/9

11:49 am-10:52 pm

1 stop12h 03m

Juneau Intl

Tue 1/13

7:00 am-3:29 pm

1 stop7h 29m

$421

San DiegoJuneau

SAN - JNU

SANJNU

San Diego

Fri 1/9

7:03 pm-9:34 pm

2 stops27h 31m

Juneau Intl

Tue 1/13

9:47 am-5:20 pm

3 stops30h 33m

$426

San DiegoJuneau

SAN - JNU

SANJNU

San Diego

Fri 1/9

9:37 am-8:03 pm

3 stops11h 26m

Juneau Intl

Tue 1/13

9:47 am-8:58 pm

3 stops10h 11m

$430

San DiegoJuneau

SAN - JNU

SANJNU

San Diego

Fri 1/9

6:15 am-1:24 pm

1 stop8h 09m

Juneau Intl

Tue 1/13

7:20 am-8:58 pm

2 stops12h 38m

$431

San DiegoJuneau

SAN - JNU

SANJNU

San Diego

Fri 1/9

11:49 am-10:52 pm

1 stop12h 03m

Juneau Intl

Tue 1/13

7:00 am-3:29 pm

1 stop7h 29m

$436

San DiegoJuneau

SAN - JNU

SANJNU

San Diego

Mon 1/5

9:15 pm-8:40 am

2 stops12h 25m

Juneau Intl

Mon 1/12

7:20 am-11:09 pm

1 stop14h 49m

$441

San DiegoJuneau

SAN - JNU

SANJNU

San Diego

Mon 1/5

6:59 pm-1:08 am

1 stop7h 09m

Juneau Intl

Mon 1/12

7:20 am-7:19 pm

1 stop10h 59m

$756

San DiegoJuneau

SAN - JNU

SANJNU

San Diego

Mon 1/5

9:41 am-7:55 pm

3 stops11h 14m

Juneau Intl

Mon 1/12

9:47 am-11:09 pm

3 stops12h 22m

$1,887

Flights are sorted by cheapest round-trip flights first.

Showing 1-10 of 12 resultsSorted by cheapest first
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See travel insights to Juneau from

How to get the cheapest flight ticket from San Diego to Juneau

Look no further. We've gone through all the searches for this route on momondo so you have the important information and insights to find the cheapest flight ticket for your trip

What is the typical price of a round-trip flight between San Diego and Juneau?

What is the cheapest day to depart on your flight to Juneau?

According to our data, Tuesday is the cheapest day to fly to Juneau from San Diego. The lowest ticket price found for a Tuesday departure recently was $494. Keep in mind that prices can always vary depending on your route and whether or not you are flying domestic or international. On the other hand, Saturday is the most expensive day to depart from San Diego because it is more convenient for both business and leisure travelers. As a result, prices tend to be around $771.

What is the cheapest time of day to depart on your flight to Juneau?

In the morning is the cheapest time of day to fly from San Diego to Juneau when you can find flight prices for as low as $499. Flying to Juneau in the morning is an ideal time because this is during off-peak travel hours. If you have a flexible travel schedule, then try to avoid flying at noon when prices are $535 on average. Flights to Juneau from San Diego at noon are generally more expensive because this time of day is more convenient for travelers’ schedules.

When to book flights from San Diego to Juneau

Are you open to changing your travel dates? Check out the ideal times to fly from San Diego to Juneau according to our flight data. Find out which month and days have the cheapest flights.
Estimated round-trip price

Cheap San Diego to Juneau (SAN to JNU) flight deals and tips

Find info about flight duration, direct flights, and airports for your flight from San Diego to Juneau

Fastest flight time

7h 11m

Direct flights

None
The fastest flight from San Diego to Juneau takes 7h 11m
There are no direct flights from San Diego to Juneau. There are no popular flight routes from San Diego to Juneau.
  • How far is San Diego to Juneau Intl by plane?

    San Diego and Juneau Intl are 1941.1 mi apart from one another. In terms of flight time, this usually takes a little over 7h 09m.

  • When did momondo last update prices for flights from San Diego Airport to Juneau Intl Airport?

    Prices for flights from San Diego Airport to Juneau Intl Airport are updated daily.

  • How many operators does momondo search for flights from San Diego Airport to Juneau Intl Airport?

  • How old do you have to be to fly from San Diego Airport to Juneau Intl Airport?

    Although the minimum age for a child to fly alone is five, airlines that offer an unaccompanied minor (UMNR) service may have their own age limits, which could be impacted by factors such as flight length, timing, and layovers. It is recommended that you verify with the airline you are booking with for travel from San Diego Airport to Juneau Intl Airport.

  • What documentation or ID do you need to fly to Juneau Intl Airport?

    The travel and health documents you'll need for your trip to Juneau Intl Airport may differ based on your itinerary and personal situation. Typically, you should have several documents on hand, such as a national ID card or driver's license and a passport that is valid for six months after your intended arrival at Juneau Intl Airport. It is always advisable to seek advice from your airline or a trusted third party, such as IATA.

  • What is the most popular airline from San Diego to Juneau?

Best airlines flying from San Diego to Juneau

Compare and see reviews for airlines that fly from San Diego to Juneau with momondo
Airline
Rating
Free Cancellation
Price
DeltaPriceFrom $465Free CancellationRating
7.9
8,011 reviews
Search Delta flights
Alaska AirlinesPriceFrom $496Free CancellationRating
8.0
11,396 reviews
Search Alaska Airlines flights

Why use momondo?

Why should I use momondo to find a flight deal from San Diego to Juneau?

To find the flight that best suits your needs, momondo gathers a range of flights from a large pool of different airlines and agents; you can then use our insights and filters to find and book the right flight to Juneau from San Diego.

Can I find flights from San Diego to Juneau with flexible booking policies on momondo?

Yes. momondo enables you to select and highlight flights to Juneau from San Diego with this policy.

How can momondo help me find flights from San Diego to Juneau?

momondo helps you find the best flight between San Diego and Juneau by providing filters to narrow your choice of flights to those matching your criteria. You can select flights based on numerous factors such as price, departure and landing times, airport and airline.

I’m not ready to book a flight from San Diego to Juneau right now. Can momondo alert me if prices change?

If you are simply researching potential flights to Juneau, momondo offers a useful price alert feature which will track prices for flights to Juneau from San Diego and alert you when they change.

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1 adult
Sat 1/3
Sat 1/10

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