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Cheap flights from Pensacola to San Juan from $102

This is the cheapest one-way flight price found by a momondo user in the last 72 hours by searching for a flight from Pensacola to San Juan departing on 1/16. Fares may change, and may not be available for all flights or travel dates. Click the price to refresh the search for this deal.
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0 bags

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Find the cheapest flights from Pensacola to San Juan

Cheap round-trip flights

Enter your travel dates to find the best prices.
Multiple Airlines Logo
4:03 pm - 1:20 am
PNS
-
SJU
7h 17m1 stop
Multiple Airlines Logo
10:59 am - 4:37 pm
SJU
-
PNS
7h 38m1 stop
$240Multiple Airlines
Sun, Jan 18 - Sun, Jan 25
Frontier Logo
9:35 am - 2:53 am
PNS
-
SJU
15h 18m1 stop
Frontier Logo
3:53 am - 8:50 am
SJU
-
PNS
6h 57m1 stop
$250Frontier
Fri, Feb 20 - Thu, Feb 26
Multiple Airlines Logo
4:03 pm - 1:20 am
PNS
-
SJU
7h 17m1 stop
Multiple Airlines Logo
2:59 am - 3:08 pm
SJU
-
PNS
14h 09m2 stops
$265Multiple Airlines
Sun, Jan 18 - Sat, Jan 24
Multiple Airlines Logo
6:37 pm - 10:17 am
PNS
-
SJU
13h 40m1 stop
Multiple Airlines Logo
6:00 am - 8:50 am
SJU
-
PNS
28h 50m1 stop
$268Multiple Airlines
Sun, Feb 15 - Thu, Feb 19
Multiple Airlines Logo
4:03 pm - 5:58 pm
PNS
-
SJU
23h 55m2 stops
Multiple Airlines Logo
6:00 am - 4:37 pm
SJU
-
PNS
12h 37m1 stop
$271Multiple Airlines
Mon, Jan 26 - Sat, Jan 31
Multiple Airlines Logo
4:03 pm - 5:58 pm
PNS
-
SJU
23h 55m2 stops
Multiple Airlines Logo
11:34 am - 4:37 pm
SJU
-
PNS
7h 03m1 stop
$272Multiple Airlines
Mon, Jan 26 - Fri, Jan 30
Multiple Airlines Logo
5:33 pm - 5:58 pm
PNS
-
SJU
46h 25m2 stops
Multiple Airlines Logo
8:00 am - 4:37 pm
SJU
-
PNS
10h 37m1 stop
$273Multiple Airlines
Thu, Jan 22 - Wed, Jan 28
Multiple Airlines Logo
6:37 pm - 10:17 am
PNS
-
SJU
13h 40m1 stop
Multiple Airlines Logo
3:53 am - 8:50 am
SJU
-
PNS
6h 57m1 stop
$277Multiple Airlines
Sun, Feb 15 - Thu, Feb 19
Multiple Airlines Logo
5:33 pm - 12:13 am
PNS
-
SJU
28h 40m2 stops
Multiple Airlines Logo
6:00 am - 3:08 pm
SJU
-
PNS
11h 08m1 stop
$278Multiple Airlines
Sun, Jan 11 - Thu, Jan 15
Spirit Airlines Logo
6:37 pm - 10:17 am
PNS
-
SJU
13h 40m1 stop
Spirit Airlines Logo
11:52 am - 5:42 pm
SJU
-
PNS
7h 50m1 stop
$279Spirit Airlines
Sun, Feb 15 - Thu, Feb 19

Spirit Airlines flights from Pensacola to San Juan

Our best Spirit Airlines deals on Pensacola to San Juan flight tickets
Spirit Airlines
Feb 15
PNS6:37 pmPensacola
13h 40m
1 stop
SJU10:17 amSan Juan Luis Munoz Marin Intl
Feb 19
SJU11:52 amSan Juan Luis Munoz Marin Intl
7h 50m
1 stop
PNS5:42 pmPensacola
$279
Find similar
Spirit Airlines
Jan 22
PNS5:33 pmPensacola
14h 14m
1 stop
SJU9:47 amSan Juan Luis Munoz Marin Intl
Jan 29
SJU6:00 amSan Juan Luis Munoz Marin Intl
12h 37m
1 stop
PNS4:37 pmPensacola
$292
Find similar
Spirit Airlines
Feb 15
PNS6:37 pmPensacola
13h 40m
1 stop
SJU10:17 amSan Juan Luis Munoz Marin Intl
Feb 21
SJU11:52 amSan Juan Luis Munoz Marin Intl
7h 50m
1 stop
PNS5:42 pmPensacola
$305
Find similar

American Airlines flights from Pensacola to San Juan

Our best American Airlines deals on Pensacola to San Juan flight tickets
American Airlines
Jan 1
PNS5:19 amPensacola
6h 35m
1 stop
SJU1:54 pmSan Juan Luis Munoz Marin Intl
Jan 5
SJU10:03 pmSan Juan Luis Munoz Marin Intl
12h 37m
1 stop
PNS8:40 amPensacola
$565
Find similar
American Airlines
Dec 29
PNS11:00 amPensacola
10h 34m
2 stops
SJU11:34 pmSan Juan Luis Munoz Marin Intl
Dec 31
SJU8:25 amSan Juan Luis Munoz Marin Intl
7h 38m
1 stop
PNS2:03 pmPensacola
$645
Find similar
American Airlines
Dec 30
PNS7:21 pmPensacola
16h 20m
1 stop
SJU1:41 pmSan Juan Luis Munoz Marin Intl
Jan 4
SJU10:03 pmSan Juan Luis Munoz Marin Intl
11h 55m
1 stop
PNS7:58 amPensacola
$862
Find similar

momondo Fare Finder

 
Customize your flight search to find flights from Pensacola to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, momondo users made 832,500 searches. Data last updated December 28, 2025.
Use the filters below to find and compare flights from Pensacola to San Juan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Sun 1/18

4:03 pm-1:20 am

1 stop7h 17m

San Juan Luis Munoz Marin Intl

Sun 1/25

10:59 am-4:37 pm

1 stop7h 38m

$240

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Fri 2/20

9:35 am-2:53 am

1 stop15h 18m

San Juan Luis Munoz Marin Intl

Thu 2/26

3:53 am-8:50 am

1 stop6h 57m

$250

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Sun 1/18

4:03 pm-1:20 am

1 stop7h 17m

San Juan Luis Munoz Marin Intl

Sat 1/24

2:59 am-3:08 pm

2 stops14h 09m

$265

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Sun 2/15

6:37 pm-10:17 am

1 stop13h 40m

San Juan Luis Munoz Marin Intl

Thu 2/19

6:00 am-8:50 am

1 stop28h 50m

$268

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Mon 1/26

4:03 pm-5:58 pm

2 stops23h 55m

San Juan Luis Munoz Marin Intl

Sat 1/31

6:00 am-4:37 pm

1 stop12h 37m

$271

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Mon 1/26

4:03 pm-5:58 pm

2 stops23h 55m

San Juan Luis Munoz Marin Intl

Fri 1/30

11:34 am-4:37 pm

1 stop7h 03m

$272

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Thu 1/22

5:33 pm-5:58 pm

2 stops46h 25m

San Juan Luis Munoz Marin Intl

Wed 1/28

8:00 am-4:37 pm

1 stop10h 37m

$273

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Sun 2/15

6:37 pm-10:17 am

1 stop13h 40m

San Juan Luis Munoz Marin Intl

Thu 2/19

3:53 am-8:50 am

1 stop6h 57m

$277

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Sun 1/11

5:33 pm-12:13 am

2 stops28h 40m

San Juan Luis Munoz Marin Intl

Thu 1/15

6:00 am-3:08 pm

1 stop11h 08m

$278

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Sun 2/15

6:37 pm-10:17 am

1 stop13h 40m

San Juan Luis Munoz Marin Intl

Thu 2/19

11:52 am-5:42 pm

1 stop7h 50m

$279

Flights are sorted by cheapest round-trip flights first.

Showing 1-10 of 20 resultsSorted by cheapest first
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See travel insights to San Juan from

How to get the cheapest flight ticket from Pensacola to San Juan

Look no further. We've gone through all the searches for this route on momondo so you have the important information and insights to find the cheapest flight ticket for your trip

What is the typical price of a round-trip flight between Pensacola and San Juan?

What is the cheapest month to fly to San Juan?

If you’re not able to fly to San Juan in February, then January is your next best option. Flight prices from Pensacola to San Juan during January average around $425.

What is the cheapest time of day to depart on your flight to San Juan?

The cheapest time of day to fly to San Juan is in the evening when flights can be purchased for as low as $306. If you have a flexible travel schedule, then try to avoid flying at noon when prices are $456 on average. Flights to San Juan from Pensacola at noon are generally more expensive because this time of day is more convenient for travelers’ schedules.

How far in advance should I book a flight to San Juan?

You are more likely to see cheaper flights to San Juan from Pensacola when booking weeks ahead of your departure date. In general, you can expect to find flights to San Juan for around $504 when searching weeks out. However, flight prices might be lower outside of this timeframe. For example, people recently found flights to San Juan from Pensacola for as low as $390 on momondo.

Cheap Pensacola to San Juan flight deals and tips

Find info about flight duration, direct flights, and airports for your flight from Pensacola to San Juan

Fastest flight time

6h 07m

Direct flights

None
The fastest flight from Pensacola to San Juan takes 6h 07m
There are no direct flights from Pensacola to San Juan. There are no popular flight routes from Pensacola to San Juan.
Search flight deals

  • How far is Pensacola to San Juan by plane?

    There are 1558.2 mi between Pensacola and San Juan. Flights usually cover this in 6h 07m, depending on flying conditions and air traffic around both airports.

  • When did momondo last update prices for flights from Pensacola Airport to San Juan?

    Prices for flights from Pensacola Airport to San Juan are updated daily.

  • How many operators does momondo search for flights from Pensacola Airport to San Juan?

  • How old do you have to be to fly from Pensacola Airport to San Juan?

    The minimum age for a child to fly alone is five, but airlines offering an unaccompanied minor (UNMR) service may have their age restrictions, such as regulations concerning flight duration, timing, and layovers. It is recommended that you verify with the airline you are booking with for travel from Pensacola Airport to San Juan.

  • What documentation or ID do you need to fly to San Juan?

    The required travel and health documents for your San Juan trip may vary depending on your itinerary and personal circumstances. As a general rule, you should carry multiple documents, including a national ID card or driver's license and a passport valid for six months after your intended arrival at San Juan. We recommend that you seek guidance from your airline or a reliable third party such as IATA.

Best airlines flying from Pensacola to San Juan

Compare and see reviews for airlines that fly from Pensacola to San Juan with momondo
Airline
Rating
Free Cancellation
Price
Spirit AirlinesPriceFrom $115Free CancellationRating
6.3
8,211 reviews
Search Spirit Airlines flights
DeltaPriceFrom $335Free CancellationRating
7.9
8,019 reviews
Search Delta flights
American AirlinesPriceFrom $362Free CancellationRating
7.2
11,073 reviews
Search American Airlines flights
United AirlinesPriceFrom $380Free CancellationRating
7.4
9,113 reviews
Search United Airlines flights
SouthwestPriceFrom $381Free CancellationRating
8.0
4,256 reviews
Search Southwest flights

Why use momondo?

Why should I use momondo to find a flight deal from Pensacola to San Juan?

To find the flight that best suits your needs, momondo gathers a range of flights from a large pool of different airlines and agents; you can then use our insights and filters to find and book the right flight to San Juan from Pensacola.

Can I find flights from Pensacola to San Juan with flexible booking policies on momondo?

Yes. momondo enables you to select and highlight flights to San Juan from Pensacola with this policy.

How can momondo help me find flights from Pensacola to San Juan?

Once all potential Pensacola to San Juan flight options are in front of you, momondo lets you sort and filter flights based on preferences such as airline, price and flight times amongst many other options.

I’m not ready to book a flight from Pensacola to San Juan right now. Can momondo alert me if prices change?

Yes momondo offers price alerts on flights to San Juan from Pensacola. After performing a search on this page you should be able to see the price alert set up feature. Simply provide a valid email address and momondo will instantly alert you when prices change.

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Find better results for your trip to Puerto Rico

Fly into one of these airports located in San Juan

Airports listed have a maximum distance of 7.1 mi from San Juan
San Juan Isla Grande Airport
San Juan Luis Munoz Marin Intl Airport