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Cheap flights from Pensacola to San Juan from $125

This is the cheapest one-way flight price found by a momondo user in the last 72 hours by searching for a flight from Pensacola to San Juan departing on 2/6. Fares may change, and may not be available for all flights or travel dates. Click the price to refresh the search for this deal.
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0 bags

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Find the cheapest flights from Pensacola to San Juan

Cheap round-trip flights

Enter your travel dates to find the best prices.
Frontier Logo
2:23 pm - 12:43 am
PNS
-
SJU
8h 20m1 stop
Frontier Logo
3:53 am - 1:38 pm
SJU
-
PNS
11h 45m1 stop
$198Frontier
Mon, Feb 23 - Sun, Mar 1
Multiple Airlines Logo
6:37 pm - 10:17 am
PNS
-
SJU
13h 40m1 stop
Multiple Airlines Logo
5:25 pm - 8:50 am
SJU
-
PNS
17h 25m1 stop
$214Multiple Airlines
Sun, Feb 22 - Thu, Feb 26
Spirit Airlines Logo
6:00 am - 2:28 pm
PNS
-
SJU
7h 28m1 stop
Spirit Airlines Logo
3:43 pm - 9:21 pm
SJU
-
PNS
6h 38m1 stop
$220Spirit Airlines
Sat, May 2 - Wed, May 6
Multiple Airlines Logo
6:37 pm - 2:48 am
PNS
-
SJU
6h 11m1 stop
Multiple Airlines Logo
3:53 am - 5:42 pm
SJU
-
PNS
15h 49m1 stop
$238Multiple Airlines
Tue, Feb 17 - Tue, Feb 24
Spirit Airlines Logo
6:37 pm - 10:17 am
PNS
-
SJU
13h 40m1 stop
Spirit Airlines Logo
11:52 am - 5:42 pm
SJU
-
PNS
7h 50m1 stop
$246Spirit Airlines
Mon, Feb 16 - Fri, Feb 20
Frontier Logo
2:23 pm - 12:43 am
PNS
-
SJU
8h 20m1 stop
Frontier Logo
6:30 am - 2:08 pm
SJU
-
PNS
8h 38m1 stop
$251Frontier
Mon, Mar 2 - Sun, Mar 8
Spirit Airlines Logo
6:37 pm - 10:17 am
PNS
-
SJU
13h 40m1 stop
Spirit Airlines Logo
11:52 am - 5:42 pm
SJU
-
PNS
7h 50m1 stop
$254Spirit Airlines
Mon, Feb 16 - Fri, Feb 20
Multiple Airlines Logo
6:37 pm - 2:53 am
PNS
-
SJU
6h 16m1 stop
Multiple Airlines Logo
3:53 am - 5:42 pm
SJU
-
PNS
15h 49m1 stop
$255Multiple Airlines
Sun, Feb 22 - Tue, Feb 24
Spirit Airlines Logo
5:33 pm - 9:47 am
PNS
-
SJU
14h 14m1 stop
Spirit Airlines Logo
11:52 am - 5:42 pm
SJU
-
PNS
7h 50m1 stop
$259Spirit Airlines
Thu, Feb 5 - Fri, Feb 13
Spirit Airlines Logo
6:00 am - 2:28 pm
PNS
-
SJU
7h 28m1 stop
Spirit Airlines Logo
3:43 pm - 9:21 pm
SJU
-
PNS
6h 38m1 stop
$260Spirit Airlines
Sat, May 2 - Wed, May 6

Spirit Airlines flights from Pensacola to San Juan

Our best Spirit Airlines deals on Pensacola to San Juan flight tickets
Spirit Airlines
May 2
PNS6:00 amPensacola
7h 28m
1 stop
SJU2:28 pmSan Juan Luis Munoz Marin Intl
May 6
SJU3:43 pmSan Juan Luis Munoz Marin Intl
6h 38m
1 stop
PNS9:21 pmPensacola
$220
Spirit Airlines
Feb 16
PNS6:37 pmPensacola
13h 40m
1 stop
SJU10:17 amSan Juan Luis Munoz Marin Intl
Feb 20
SJU11:52 amSan Juan Luis Munoz Marin Intl
7h 50m
1 stop
PNS5:42 pmPensacola
$246
Spirit Airlines
Feb 16
PNS6:37 pmPensacola
13h 40m
1 stop
SJU10:17 amSan Juan Luis Munoz Marin Intl
Feb 20
SJU11:52 amSan Juan Luis Munoz Marin Intl
7h 50m
1 stop
PNS5:42 pmPensacola
$254

Frontier flights from Pensacola to San Juan

Our best Frontier deals on Pensacola to San Juan flight tickets
Frontier
Feb 23
PNS2:23 pmPensacola
8h 20m
1 stop
SJU12:43 amSan Juan Luis Munoz Marin Intl
Mar 1
SJU3:53 amSan Juan Luis Munoz Marin Intl
11h 45m
1 stop
PNS1:38 pmPensacola
$198
Frontier
Mar 2
PNS2:23 pmPensacola
8h 20m
1 stop
SJU12:43 amSan Juan Luis Munoz Marin Intl
Mar 8
SJU6:30 amSan Juan Luis Munoz Marin Intl
8h 38m
1 stop
PNS2:08 pmPensacola
$251

momondo Fare Finder

 
Customize your flight search to find flights from Pensacola to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, momondo users made 832,500 searches. Data last updated January 8, 2026.
Use the filters below to find and compare flights from Pensacola to San Juan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Mon 2/23

2:23 pm-12:43 am

1 stop8h 20m

San Juan Luis Munoz Marin Intl

Sun 3/1

3:53 am-1:38 pm

1 stop11h 45m

$198

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Sun 2/22

6:37 pm-10:17 am

1 stop13h 40m

San Juan Luis Munoz Marin Intl

Thu 2/26

5:25 pm-8:50 am

1 stop17h 25m

$214

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Sat 5/2

6:00 am-2:28 pm

1 stop7h 28m

San Juan Luis Munoz Marin Intl

Wed 5/6

3:43 pm-9:21 pm

1 stop6h 38m

$220

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Tue 2/17

6:37 pm-2:48 am

1 stop6h 11m

San Juan Luis Munoz Marin Intl

Tue 2/24

3:53 am-5:42 pm

1 stop15h 49m

$238

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Mon 2/16

6:37 pm-10:17 am

1 stop13h 40m

San Juan Luis Munoz Marin Intl

Fri 2/20

11:52 am-5:42 pm

1 stop7h 50m

$246

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Mon 3/2

2:23 pm-12:43 am

1 stop8h 20m

San Juan Luis Munoz Marin Intl

Sun 3/8

6:30 am-2:08 pm

1 stop8h 38m

$251

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Mon 2/16

6:37 pm-10:17 am

1 stop13h 40m

San Juan Luis Munoz Marin Intl

Fri 2/20

11:52 am-5:42 pm

1 stop7h 50m

$254

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Sun 2/22

6:37 pm-2:53 am

1 stop6h 16m

San Juan Luis Munoz Marin Intl

Tue 2/24

3:53 am-5:42 pm

1 stop15h 49m

$255

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Thu 2/5

5:33 pm-9:47 am

1 stop14h 14m

San Juan Luis Munoz Marin Intl

Fri 2/13

11:52 am-5:42 pm

1 stop7h 50m

$259

PensacolaSan Juan

PNS - SJU

PNSSJU

Pensacola

Sat 5/2

6:00 am-2:28 pm

1 stop7h 28m

San Juan Luis Munoz Marin Intl

Wed 5/6

3:43 pm-9:21 pm

1 stop6h 38m

$260

Flights are sorted by cheapest round-trip flights first.

Showing 1-10 of 20 resultsSorted by cheapest first
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How to get the cheapest flight ticket from Pensacola to San Juan

Look no further. We've gone through all the searches for this route on momondo so you have the important information and insights to find the cheapest flight ticket for your trip

What is the cheapest month to fly to San Juan?

If you’re not able to fly to San Juan in February, then January is your next best option. Flight prices from Pensacola to San Juan during January average around $425.

How far in advance should I book a flight to San Juan?

You are more likely to see cheaper flights to San Juan from Pensacola when booking weeks ahead of your departure date. In general, you can expect to find flights to San Juan for around $503 when searching weeks out. However, flight prices might be lower outside of this timeframe. For example, people recently found flights to San Juan from Pensacola for as low as $390 on momondo.

Cheap Pensacola to San Juan flight deals and tips

Find info about flight duration, direct flights, and airports for your flight from Pensacola to San Juan

Fastest flight time

5h 52m

Direct flights

None
The fastest flight from Pensacola to San Juan takes 5h 52m
There are no direct flights from Pensacola to San Juan. There are no popular flight routes from Pensacola to San Juan.
Search flight deals

  • How far is Pensacola to San Juan by plane?

    There are 1558.2 mi between Pensacola and San Juan. Flights usually cover this in 5h 52m, depending on flying conditions and air traffic around both airports.

  • When did momondo last update prices for flights from Pensacola Airport to San Juan?

    Prices for flights from Pensacola Airport to San Juan are updated daily.

  • How many operators does momondo search for flights from Pensacola Airport to San Juan?

  • How old do you have to be to fly from Pensacola Airport to San Juan?

    The minimum age for a child to fly alone is five, but airlines offering an unaccompanied minor (UNMR) service may have their age restrictions, such as regulations concerning flight duration, timing, and layovers. It is recommended that you verify with the airline you are booking with for travel from Pensacola Airport to San Juan.

  • What documentation or ID do you need to fly to San Juan?

    The required travel and health documents for your San Juan trip may vary depending on your itinerary and personal circumstances. As a general rule, you should carry multiple documents, including a national ID card or driver's license and a passport valid for six months after your intended arrival at San Juan. We recommend that you seek guidance from your airline or a reliable third party such as IATA.

Best airlines flying from Pensacola to San Juan

Compare and see reviews for airlines that fly from Pensacola to San Juan with momondo
Airline
Rating
Free Cancellation
Price
Spirit AirlinesPriceFrom $115Free CancellationRating
6.3
8,287 reviews
Search Spirit Airlines flights
DeltaPriceFrom $335Free CancellationRating
7.9
8,025 reviews
Search Delta flights
American AirlinesPriceFrom $374Free CancellationRating
7.2
11,095 reviews
Search American Airlines flights
United AirlinesPriceFrom $380Free CancellationRating
7.4
9,139 reviews
Search United Airlines flights
SouthwestPriceFrom $381Free CancellationRating
8.0
4,248 reviews
Search Southwest flights

Why use momondo?

Why should I use momondo to find a flight deal from Pensacola to San Juan?

To find the flight that best suits your needs, momondo gathers a range of flights from a large pool of different airlines and agents; you can then use our insights and filters to find and book the right flight to San Juan from Pensacola.

Can I find flights from Pensacola to San Juan with flexible booking policies on momondo?

Yes. momondo enables you to select and highlight flights to San Juan from Pensacola with this policy.

How can momondo help me find flights from Pensacola to San Juan?

Once all potential Pensacola to San Juan flight options are in front of you, momondo lets you sort and filter flights based on preferences such as airline, price and flight times amongst many other options.

I’m not ready to book a flight from Pensacola to San Juan right now. Can momondo alert me if prices change?

Yes momondo offers price alerts on flights to San Juan from Pensacola. After performing a search on this page you should be able to see the price alert set up feature. Simply provide a valid email address and momondo will instantly alert you when prices change.

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Find better results for your trip to Puerto Rico

Fly into one of these airports located in San Juan

Airports listed have a maximum distance of 7.1 mi from San Juan
San Juan Isla Grande Airport
San Juan Luis Munoz Marin Intl Airport