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Cheap flights from Fort Myers to San Juan from $112

This is the cheapest one-way flight price found by a momondo user in the last 72 hours by searching for a flight from Fort Myers to San Juan departing on 3/24. Fares may change, and may not be available for all flights or travel dates. Click the price to refresh the search for this deal.
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0 bags

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Find the cheapest flights from Fort Myers to San Juan

Cheap round-trip flights

Enter your travel dates to find the best prices.
Frontier Logo
11:40 am - 12:29 am
RSW
-
SJU
12h 49m
1 stop
Frontier Logo
1:59 am - 10:45 am
SJU
-
RSW
8h 46m
1 stop
$203Frontier
Tue, May 5 - Fri, May 8
Multiple Airlines Logo
6:00 am - 8:50 pm
RSW
-
SJU
14h 50m
2 stops
Multiple Airlines Logo
1:59 am - 10:45 am
SJU
-
RSW
8h 46m
1 stop
$263Multiple Airlines
Tue, May 5 - Fri, May 8
Frontier Logo
11:40 am - 12:29 am
RSW
-
SJU
12h 49m
1 stop
Frontier Logo
1:59 am - 10:45 am
SJU
-
RSW
8h 46m
1 stop
$269Frontier
Sat, Apr 25 - Sun, Apr 26
Southwest Logo
12:55 pm - 11:40 pm
RSW
-
SJU
10h 45m
2 stops
Southwest Logo
5:45 am - 11:00 am
SJU
-
RSW
5h 15m
1 stop
$273Southwest
Tue, Apr 28 - Sat, May 9
Southwest Logo
10:30 am - 10:40 pm
RSW
-
SJU
12h 10m
1 stop
Southwest Logo
11:25 am - 9:35 pm
SJU
-
RSW
10h 10m
1 stop
$276Southwest
Tue, May 5 - Tue, May 12
Multiple Airlines Logo
11:40 am - 12:29 am
RSW
-
SJU
12h 49m
1 stop
Multiple Airlines Logo
4:34 pm - 10:17 am
SJU
-
RSW
17h 43m
1 stop
$281Multiple Airlines
Thu, May 14 - Sun, May 17
Spirit Airlines Logo
7:24 pm - 7:19 pm
RSW
-
SJU
23h 55m
1 stop
Spirit Airlines Logo
10:00 am - 6:19 pm
SJU
-
RSW
8h 19m
1 stop
$283Spirit Airlines
Wed, Apr 1 - Wed, Apr 8
Spirit Airlines Logo
7:35 am - 2:29 am
RSW
-
SJU
18h 54m
1 stop
Spirit Airlines Logo
7:54 pm - 3:05 pm
SJU
-
RSW
19h 11m
2 stops
$284Spirit Airlines
Mon, Mar 16 - Wed, Mar 18
Multiple Airlines Logo
7:24 pm - 7:19 pm
RSW
-
SJU
23h 55m
1 stop
Multiple Airlines Logo
1:59 am - 10:45 am
SJU
-
RSW
8h 46m
1 stop
$286Multiple Airlines
Tue, Apr 7 - Mon, May 4
Southwest Logo
9:20 am - 9:05 pm
RSW
-
SJU
11h 45m
2 stops
Southwest Logo
5:15 am - 4:15 pm
SJU
-
RSW
11h 00m
2 stops
$288Southwest
Tue, May 5 - Sat, May 9

Southwest flights from Fort Myers to San Juan

Our best Southwest deals on Fort Myers to San Juan flight tickets
Southwest
Apr 28
RSW12:55 pmFort Myers SW Florida Intl
10h 45m
2 stops
SJU11:40 pmSan Juan Luis Munoz Marin Intl
May 9
SJU5:45 amSan Juan Luis Munoz Marin Intl
5h 15m
1 stop
RSW11:00 amFort Myers SW Florida Intl
$273
Southwest
May 5
RSW10:30 amFort Myers SW Florida Intl
12h 10m
1 stop
SJU10:40 pmSan Juan Luis Munoz Marin Intl
May 12
SJU11:25 amSan Juan Luis Munoz Marin Intl
10h 10m
1 stop
RSW9:35 pmFort Myers SW Florida Intl
$276
Southwest
May 5
RSW9:20 amFort Myers SW Florida Intl
11h 45m
2 stops
SJU9:05 pmSan Juan Luis Munoz Marin Intl
May 9
SJU5:15 amSan Juan Luis Munoz Marin Intl
11h 00m
2 stops
RSW4:15 pmFort Myers SW Florida Intl
$288

Frontier flights from Fort Myers to San Juan

Our best Frontier deals on Fort Myers to San Juan flight tickets
Frontier
May 5
RSW11:40 amFort Myers SW Florida Intl
12h 49m
1 stop
SJU12:29 amSan Juan Luis Munoz Marin Intl
May 8
SJU1:59 amSan Juan Luis Munoz Marin Intl
8h 46m
1 stop
RSW10:45 amFort Myers SW Florida Intl
$203
Frontier
Apr 25
RSW11:40 amFort Myers SW Florida Intl
12h 49m
1 stop
SJU12:29 amSan Juan Luis Munoz Marin Intl
Apr 26
SJU1:59 amSan Juan Luis Munoz Marin Intl
8h 46m
1 stop
RSW10:45 amFort Myers SW Florida Intl
$269
Frontier
May 14
RSW11:40 amFort Myers SW Florida Intl
12h 49m
1 stop
SJU12:29 amSan Juan Luis Munoz Marin Intl
May 17
SJU9:12 pmSan Juan Luis Munoz Marin Intl
13h 33m
1 stop
RSW10:45 amFort Myers SW Florida Intl
$290

momondo Fare Finder

 
Customize your flight search to find flights from Fort Myers to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, momondo users made 832,500 searches. Data last updated March 5, 2026.
Use the filters below to find and compare flights from Fort Myers to San Juan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Tue 5/5

11:40 am-12:29 am

1 stop12h 49m

San Juan Luis Munoz Marin Intl

Fri 5/8

1:59 am-10:45 am

1 stop8h 46m

$203

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Tue 5/5

6:00 am-8:50 pm

2 stops14h 50m

San Juan Luis Munoz Marin Intl

Fri 5/8

1:59 am-10:45 am

1 stop8h 46m

$263

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Sat 4/25

11:40 am-12:29 am

1 stop12h 49m

San Juan Luis Munoz Marin Intl

Sun 4/26

1:59 am-10:45 am

1 stop8h 46m

$269

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Tue 4/28

12:55 pm-11:40 pm

2 stops10h 45m

San Juan Luis Munoz Marin Intl

Sat 5/9

5:45 am-11:00 am

1 stop5h 15m

$273

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Tue 5/5

10:30 am-10:40 pm

1 stop12h 10m

San Juan Luis Munoz Marin Intl

Tue 5/12

11:25 am-9:35 pm

1 stop10h 10m

$276

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Thu 5/14

11:40 am-12:29 am

1 stop12h 49m

San Juan Luis Munoz Marin Intl

Sun 5/17

4:34 pm-10:17 am

1 stop17h 43m

$281

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Wed 4/1

7:24 pm-7:19 pm

1 stop23h 55m

San Juan Luis Munoz Marin Intl

Wed 4/8

10:00 am-6:19 pm

1 stop8h 19m

$283

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Mon 3/16

7:35 am-2:29 am

1 stop18h 54m

San Juan Luis Munoz Marin Intl

Wed 3/18

7:54 pm-3:05 pm

2 stops19h 11m

$284

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Tue 4/7

7:24 pm-7:19 pm

1 stop23h 55m

San Juan Luis Munoz Marin Intl

Mon 5/4

1:59 am-10:45 am

1 stop8h 46m

$286

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Tue 5/5

9:20 am-9:05 pm

2 stops11h 45m

San Juan Luis Munoz Marin Intl

Sat 5/9

5:15 am-4:15 pm

2 stops11h 00m

$288

Flights are sorted by cheapest round-trip flights first.

Showing 1-10 of 20 resultsSorted by cheapest first
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See travel insights to San Juan from

How to get the cheapest flight ticket from Fort Myers to San Juan

Look no further. We've gone through all the searches for this route on momondo so you have the important information and insights to find the cheapest flight ticket for your trip

What is the cheapest month to fly to San Juan?

If you’re not able to fly to San Juan in June, then September is your next best option. Flight prices from Fort Myers to San Juan during September average around $340.

What is the cheapest time of day to depart on your flight to San Juan?

The cheapest time of day to fly to San Juan is in the evening when flights can be purchased for as low as $119. If you have a flexible travel schedule, then try to avoid flying at noon when prices are $170 on average. Flights to San Juan from Fort Myers at noon are generally more expensive because this time of day is more convenient for travelers’ schedules.

How far in advance should I book a flight to San Juan?

You are more likely to see cheaper flights to San Juan from Fort Myers when booking weeks ahead of your departure date. In general, you can expect to find flights to San Juan for around $417 when searching weeks out. However, flight prices might be lower outside of this timeframe. For example, people recently found flights to San Juan from Fort Myers for as low as $291 on momondo.

Cheap Fort Myers to San Juan flight deals and tips

Find info about flight duration, direct flights, and airports for your flight from Fort Myers to San Juan

Fastest flight time

5h 55m

Direct flights

None
The fastest flight from Fort Myers to San Juan takes 5h 55m
There are no direct flights from Fort Myers to San Juan. There are no popular flight routes from Fort Myers to San Juan.
Search flight deals

  • How far is Fort Myers SW Florida Intl to San Juan by plane?

    The distance between Fort Myers SW Florida Intl and San Juan is about 1151.3 mi. Typically, this will take 5h 55m by plane in normal conditions.

  • When did momondo last update prices for flights from Fort Myers SW Florida Intl Airport to San Juan?

    Prices for flights from Fort Myers SW Florida Intl Airport to San Juan are updated daily.

  • How many operators does momondo search for flights from Fort Myers SW Florida Intl Airport to San Juan?

  • How old do you have to be to fly from Fort Myers SW Florida Intl Airport to San Juan?

    The minimum age a child must be to fly alone is five but airlines that offer an unaccompanied minor (UNMR) service will have their own age restrictions, including rules around flight length, timings, and stopovers. We always recommend checking with the individual airline you are booking with to travel from Fort Myers SW Florida Intl Airport to San Juan.

  • What documentation or ID do you need to fly to San Juan?

    The travel and health documents required for your trip to San Juan can vary based on your itinerary and personal situation. As a rule, consider having multiple documents such as a national ID card or driver’s license, and a passport valid for six-months after you plan to arrive at San Juan. We always recommend checking with your airline or a trusted third party such as IATA to get advice.

Best airlines flying from Fort Myers to San Juan

Compare and see reviews for airlines that fly from Fort Myers to San Juan with momondo
Airline
Rating
Free Cancellation
Price
FrontierPriceFrom $138Free CancellationRating
5.7
3,041 reviews
Search Frontier flights
DeltaPriceFrom $245Free CancellationRating
7.9
8,250 reviews
Search Delta flights
JetBluePriceFrom $254Free CancellationRating
7.2
2,896 reviews
Search JetBlue flights
SouthwestPriceFrom $333Free CancellationRating
8.0
4,307 reviews
Search Southwest flights
American AirlinesPriceFrom $365Free CancellationRating
7.1
11,382 reviews
Search American Airlines flights

Why use momondo?

Why should I use momondo to find a flight deal from Fort Myers to San Juan?

It is quick and easy to find Fort Myers to San Juan flights on momondo. We search and return numerous flight options from various airlines and agents. You can then use our filters to narrow your search until you have found the most convenient flight to San Juan that suits you.

Can I find flights from Fort Myers to San Juan with flexible booking policies on momondo?

Flights from Fort Myers to San Juan with flexible booking policies can be found by using the search form above and then selecting our dedicated flexible booking filter, which will highlight only the flights where this policy is applied.

How can momondo help me find flights from Fort Myers to San Juan?

momondo helps you find the best flight between Fort Myers and San Juan by providing filters to narrow your choice of flights to those matching your criteria. You can select flights based on numerous factors such as price, departure and landing times, airport and airline.

I’m not ready to book a flight from Fort Myers to San Juan right now. Can momondo alert me if prices change?

If you are simply researching potential flights to San Juan, momondo offers a useful price alert feature which will track prices for flights to San Juan from Fort Myers and alert you when they change.

An easier way to manage your San Juan trip

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Find better results for your trip to Puerto Rico

Fly into one of these airports located in San Juan

Airports listed have a maximum distance of 7.1 mi from San Juan
San Juan Isla Grande Airport
San Juan Luis Munoz Marin Intl Airport