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Cheap flights from Fort Myers to San Juan from $138

This is the cheapest one-way flight price found by a momondo user in the last 72 hours by searching for a flight from Fort Myers to San Juan departing on 9/3. Fares may change, and may not be available for all flights or travel dates. Click the price to refresh the search for this deal.
1 adult
1 adult, Economy, 0 bags

Discover deals from 900+ travel sites with momondo.

Find the cheapest flights from Fort Myers to San Juan

Cheap round-trip flights

Enter your travel dates to find the best prices.
Frontier Logo
12:46 pm - 10:13 am
RSW
-
SJU
21h 27m
1 stop
Frontier Logo
5:27 pm - 4:45 pm
SJU
-
RSW
23h 18m
1 stop
$256Frontier
Thu, Sep 17 - Wed, Sep 23
Frontier Logo
12:45 pm - 11:50 pm
RSW
-
SJU
11h 05m
1 stop
Frontier Logo
2:36 pm - 11:50 am
SJU
-
RSW
21h 14m
1 stop
$256Frontier
Fri, Oct 23 - Wed, Oct 28
Multiple Airlines Logo
11:21 am - 1:10 am
RSW
-
SJU
13h 49m
1 stop
Multiple Airlines Logo
12:59 am - 11:51 am
SJU
-
RSW
10h 52m
1 stop
$317Multiple Airlines
Wed, Sep 30 - Sat, Oct 3
Multiple Airlines Logo
7:00 am - 11:58 pm
RSW
-
SJU
16h 58m
2 stops
Multiple Airlines Logo
12:59 am - 11:51 am
SJU
-
RSW
10h 52m
1 stop
$330Multiple Airlines
Mon, Sep 14 - Wed, Sep 16
Southwest Logo
8:45 am - 7:00 pm
RSW
-
SJU
10h 15m
2 stops
Southwest Logo
6:00 am - 8:10 pm
SJU
-
RSW
14h 10m
1 stop
$366Southwest
Wed, Aug 19 - Wed, Aug 26
Southwest Logo
8:45 am - 7:00 pm
RSW
-
SJU
10h 15m
2 stops
Southwest Logo
8:20 am - 7:50 pm
SJU
-
RSW
11h 30m
2 stops
$366Southwest
Wed, Aug 19 - Wed, Aug 26
Delta Logo
1:19 pm - 10:29 pm
RSW
-
SJU
9h 10m
1 stop
Delta Logo
5:49 pm - 12:40 am
SJU
-
RSW
6h 51m
1 stop
$436Delta
Wed, Aug 26 - Fri, Aug 28
Delta Logo
6:46 am - 1:42 pm
RSW
-
SJU
6h 56m
1 stop
Delta Logo
5:49 pm - 12:40 am
SJU
-
RSW
6h 51m
1 stop
$436Delta
Sat, Aug 22 - Sat, Aug 29
American Airlines Logo
8:40 am - 8:50 pm
RSW
-
SJU
11h 10m
1 stop
American Airlines Logo
2:52 pm - 11:33 pm
SJU
-
RSW
9h 41m
2 stops
$471American Airlines
Wed, Jan 6 - Wed, Feb 3
American Airlines Logo
8:40 am - 8:50 pm
RSW
-
SJU
11h 10m
1 stop
American Airlines Logo
7:00 am - 3:22 pm
SJU
-
RSW
9h 22m
1 stop
$471American Airlines
Wed, Jan 6 - Wed, Feb 3

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Southwest flights from Fort Myers to San Juan

Our best Southwest deals on Fort Myers to San Juan flight tickets
Southwest
Sep 17
RSW11:55 amFort Myers SW Florida Intl
10h 20m
2 stops
SJU10:15 pmSan Juan Luis Munoz Marin Intl
Sep 23
SJU8:20 amSan Juan Luis Munoz Marin Intl
11h 35m
2 stops
RSW7:55 pmFort Myers SW Florida Intl
$366
Southwest
Sep 4
RSW12:05 pmFort Myers SW Florida Intl
10h 10m
2 stops
SJU10:15 pmSan Juan Luis Munoz Marin Intl
Sep 6
SJU9:40 amSan Juan Luis Munoz Marin Intl
12h 00m
2 stops
RSW9:40 pmFort Myers SW Florida Intl
$388
Southwest
Aug 20
RSW5:05 pmFort Myers SW Florida Intl
5h 05m
1 stop
SJU10:10 pmSan Juan Luis Munoz Marin Intl
Aug 27
SJU2:35 pmSan Juan Luis Munoz Marin Intl
7h 25m
1 stop
RSW10:00 pmFort Myers SW Florida Intl
$396

Frontier flights from Fort Myers to San Juan

Our best Frontier deals on Fort Myers to San Juan flight tickets
Frontier
Oct 23
RSW12:45 pmFort Myers SW Florida Intl
11h 05m
1 stop
SJU11:50 pmSan Juan Luis Munoz Marin Intl
Oct 28
SJU2:36 pmSan Juan Luis Munoz Marin Intl
21h 14m
1 stop
RSW11:50 amFort Myers SW Florida Intl
$256
Frontier
Sep 4
RSW12:50 pmFort Myers SW Florida Intl
20h 29m
1 stop
SJU9:19 amSan Juan Luis Munoz Marin Intl
Sep 6
SJU7:55 pmSan Juan Luis Munoz Marin Intl
16h 05m
1 stop
RSW12:00 pmFort Myers SW Florida Intl
$276
Frontier
Oct 23
RSW12:45 pmFort Myers SW Florida Intl
22h 19m
1 stop
SJU11:04 amSan Juan Luis Munoz Marin Intl
Oct 28
SJU5:12 pmSan Juan Luis Munoz Marin Intl
42h 38m
2 stops
RSW11:50 amFort Myers SW Florida Intl
$285

momondo Fare Finder

 
Customize your flight search to find flights from Fort Myers to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, momondo users made 832,500 searches. Data last updated August 2, 2026.
Use the filters below to find and compare flights from Fort Myers to San Juan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Thu 9/17

12:46 pm-10:13 am

1 stop21h 27m

San Juan Luis Munoz Marin Intl

Wed 9/23

5:27 pm-4:45 pm

1 stop23h 18m

$256

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Fri 10/23

12:45 pm-11:50 pm

1 stop11h 05m

San Juan Luis Munoz Marin Intl

Wed 10/28

2:36 pm-11:50 am

1 stop21h 14m

$256

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Wed 9/30

11:21 am-1:10 am

1 stop13h 49m

San Juan Luis Munoz Marin Intl

Sat 10/3

12:59 am-11:51 am

1 stop10h 52m

$317

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Mon 9/14

7:00 am-11:58 pm

2 stops16h 58m

San Juan Luis Munoz Marin Intl

Wed 9/16

12:59 am-11:51 am

1 stop10h 52m

$330

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Wed 8/19

8:45 am-7:00 pm

2 stops10h 15m

San Juan Luis Munoz Marin Intl

Wed 8/26

6:00 am-8:10 pm

1 stop14h 10m

$366

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Wed 8/19

8:45 am-7:00 pm

2 stops10h 15m

San Juan Luis Munoz Marin Intl

Wed 8/26

8:20 am-7:50 pm

2 stops11h 30m

$366

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Wed 8/26

1:19 pm-10:29 pm

1 stop9h 10m

San Juan Luis Munoz Marin Intl

Fri 8/28

5:49 pm-12:40 am

1 stop6h 51m

$436
Quickest round-trip

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Sat 8/22

6:46 am-1:42 pm

1 stop6h 56m

San Juan Luis Munoz Marin Intl

Sat 8/29

5:49 pm-12:40 am

1 stop6h 51m

$436

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Wed 1/6

8:40 am-8:50 pm

1 stop11h 10m

San Juan Luis Munoz Marin Intl

Wed 2/3

2:52 pm-11:33 pm

2 stops9h 41m

$471

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Wed 1/6

8:40 am-8:50 pm

1 stop11h 10m

San Juan Luis Munoz Marin Intl

Wed 2/3

7:00 am-3:22 pm

1 stop9h 22m

$471

Flights are sorted by cheapest round-trip flights first.

Showing 1-10 of 20 resultsSorted by cheapest first
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See travel insights to San Juan from

How to get the cheapest flight ticket from Fort Myers to San Juan

Look no further. We've gone through all the searches for this route on momondo so you have the important information and insights to find the cheapest flight ticket for your trip

What is the typical price of a round-trip flight between Fort Myers and San Juan?

Prices are currently low for flights on this route.

Typical prices usually range from $367 to $450.
The lowest price recently found on this route was $256.

What is the cheapest month to fly to San Juan?

If you’re not able to fly to San Juan in September, then January is your next best option. Flight prices from Fort Myers to San Juan during January average around $360.

Cheap Fort Myers to San Juan flight deals and tips

Find info about flight duration, direct flights, and airports for your flight from Fort Myers to San Juan

Fastest flight time

4h 30m

Direct flights

None
The fastest flight from Fort Myers to San Juan takes 4h 30m
There are no direct flights from Fort Myers to San Juan. There are no popular flight routes from Fort Myers to San Juan.
Search flight deals

Frequently asked questions about flying from Fort Myers to San Juan

  • How far is Fort Myers SW Florida Intl to San Juan by plane?

    The distance between Fort Myers SW Florida Intl and San Juan is about 1151.3 mi. Typically, this will take 4h 30m by plane in normal conditions.

  • When did momondo last update prices for flights from Fort Myers SW Florida Intl Airport to San Juan?

    Prices for flights from Fort Myers SW Florida Intl Airport to San Juan are updated daily.

  • How many operators does momondo search for flights from Fort Myers SW Florida Intl Airport to San Juan?

  • How old do you have to be to fly from Fort Myers SW Florida Intl Airport to San Juan?

    The minimum age a child must be to fly alone is five but airlines that offer an unaccompanied minor (UNMR) service will have their own age restrictions, including rules around flight length, timings, and stopovers. We always recommend checking with the individual airline you are booking with to travel from Fort Myers SW Florida Intl Airport to San Juan.

  • What documentation or ID do you need to fly to San Juan?

    The travel and health documents required for your trip to San Juan can vary based on your itinerary and personal situation. As a rule, consider having multiple documents such as a national ID card or driver’s license, and a passport valid for six-months after you plan to arrive at San Juan. We always recommend checking with your airline or a trusted third party such as IATA to get advice.

Best airlines flying from Fort Myers to San Juan

Compare and see reviews for airlines that fly from Fort Myers to San Juan with momondo
Airline
Rating
Free Cancellation
Price
FrontierPriceFrom $138Free CancellationRating
5.6
2,741 reviews
Search Frontier flights
DeltaPriceFrom $245Free CancellationRating
7.8
8,494 reviews
Search Delta flights
SouthwestPriceFrom $325Free CancellationRating
8.0
4,229 reviews
Search Southwest flights
American AirlinesPriceFrom $365Free CancellationRating
7.1
11,845 reviews
Search American Airlines flights

Why use momondo?

Why should I use momondo to find a flight deal from Fort Myers to San Juan?

It is quick and easy to find Fort Myers to San Juan flights on momondo. We search and return numerous flight options from various airlines and agents. You can then use our filters to narrow your search until you have found the most convenient flight to San Juan that suits you.

Can I find flights from Fort Myers to San Juan with flexible booking policies on momondo?

Flights from Fort Myers to San Juan with flexible booking policies can be found by using the search form above and then selecting our dedicated flexible booking filter, which will highlight only the flights where this policy is applied.

How can momondo help me find flights from Fort Myers to San Juan?

momondo helps you find the best flight between Fort Myers and San Juan by providing filters to narrow your choice of flights to those matching your criteria. You can select flights based on numerous factors such as price, departure and landing times, airport and airline.

I’m not ready to book a flight from Fort Myers to San Juan right now. Can momondo alert me if prices change?

If you are simply researching potential flights to San Juan, momondo offers a useful price alert feature which will track prices for flights to San Juan from Fort Myers and alert you when they change.

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Find better results for your trip to Puerto Rico

Fly into one of these airports located in San Juan

Airports listed have a maximum distance of 7.1 mi from San Juan
San Juan Isla Grande Airport
San Juan Luis Munoz Marin Intl Airport