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Cheap flights from Fort Myers to San Juan from $154

This is the cheapest one-way flight price found by a momondo user in the last 72 hours by searching for a flight from Fort Myers to San Juan departing on 6/9. Fares may change, and may not be available for all flights or travel dates. Click the price to refresh the search for this deal.
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0 bags

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Find the cheapest flights from Fort Myers to San Juan

Cheap round-trip flights

Enter your travel dates to find the best prices.
Frontier Logo
12:45 pm - 11:50 pm
RSW
-
SJU
11h 05m
1 stop
Frontier Logo
1:59 am - 11:50 am
SJU
-
RSW
9h 51m
1 stop
$310Frontier
Fri, Sep 25 - Sun, Sep 27
Southwest Logo
7:10 am - 6:10 pm
RSW
-
SJU
11h 00m
2 stops
Southwest Logo
8:20 am - 7:50 pm
SJU
-
RSW
11h 30m
2 stops
$316Southwest
Wed, Aug 26 - Tue, Sep 1
Southwest Logo
8:45 am - 6:10 pm
RSW
-
SJU
9h 25m
2 stops
Southwest Logo
8:20 am - 7:50 pm
SJU
-
RSW
11h 30m
2 stops
$321Southwest
Wed, Aug 5 - Wed, Aug 12
Southwest Logo
5:05 pm - 11:50 pm
RSW
-
SJU
6h 45m
1 stop
Southwest Logo
8:20 am - 7:50 pm
SJU
-
RSW
11h 30m
2 stops
$326Southwest
Thu, Sep 24 - Wed, Sep 30
Southwest Logo
7:35 am - 7:45 pm
RSW
-
SJU
12h 10m
1 stop
Southwest Logo
5:15 am - 5:00 pm
SJU
-
RSW
11h 45m
2 stops
$343Southwest
Tue, Jul 28 - Tue, Aug 4
Southwest Logo
7:05 am - 4:55 pm
RSW
-
SJU
9h 50m
2 stops
Southwest Logo
10:00 am - 8:10 pm
SJU
-
RSW
10h 10m
2 stops
$348Southwest
Mon, Aug 17 - Thu, Aug 20
Frontier Logo
8:28 pm - 3:55 pm
RSW
-
SJU
19h 27m
1 stop
Frontier Logo
6:45 pm - 7:21 pm
SJU
-
RSW
24h 36m
1 stop
$357Frontier
Tue, Jun 9 - Sat, Jun 13
Frontier Logo
8:01 pm - 4:01 am
RSW
-
SJU
8h 00m
1 stop
Frontier Logo
6:44 am - 7:21 pm
SJU
-
RSW
12h 37m
1 stop
$366Frontier
Sun, Jun 7 - Thu, Jun 11
Southwest Logo
11:25 am - 10:05 pm
RSW
-
SJU
10h 40m
2 stops
Southwest Logo
5:15 am - 5:00 pm
SJU
-
RSW
11h 45m
2 stops
$370Southwest
Tue, Jul 28 - Tue, Aug 4
Southwest Logo
5:05 pm - 11:50 pm
RSW
-
SJU
6h 45m
1 stop
Southwest Logo
5:15 am - 11:35 am
SJU
-
RSW
6h 20m
1 stop
$371Southwest
Thu, Sep 24 - Wed, Sep 30

Frontier flights from Fort Myers to San Juan

Our best Frontier deals on Fort Myers to San Juan flight tickets
Frontier
Sep 25
RSW12:45 pmFort Myers SW Florida Intl
11h 05m
1 stop
SJU11:50 pmSan Juan Luis Munoz Marin Intl
Sep 27
SJU1:59 amSan Juan Luis Munoz Marin Intl
9h 51m
1 stop
RSW11:50 amFort Myers SW Florida Intl
$310
Frontier
Jun 9
RSW8:28 pmFort Myers SW Florida Intl
19h 27m
1 stop
SJU3:55 pmSan Juan Luis Munoz Marin Intl
Jun 13
SJU6:45 pmSan Juan Luis Munoz Marin Intl
24h 36m
1 stop
RSW7:21 pmFort Myers SW Florida Intl
$357
Frontier
Jun 7
RSW8:01 pmFort Myers SW Florida Intl
8h 00m
1 stop
SJU4:01 amSan Juan Luis Munoz Marin Intl
Jun 11
SJU6:44 amSan Juan Luis Munoz Marin Intl
12h 37m
1 stop
RSW7:21 pmFort Myers SW Florida Intl
$366

Southwest flights from Fort Myers to San Juan

Our best Southwest deals on Fort Myers to San Juan flight tickets
Southwest
Aug 26
RSW7:10 amFort Myers SW Florida Intl
11h 00m
2 stops
SJU6:10 pmSan Juan Luis Munoz Marin Intl
Sep 1
SJU8:20 amSan Juan Luis Munoz Marin Intl
11h 30m
2 stops
RSW7:50 pmFort Myers SW Florida Intl
$316
Southwest
Aug 5
RSW8:45 amFort Myers SW Florida Intl
9h 25m
2 stops
SJU6:10 pmSan Juan Luis Munoz Marin Intl
Aug 12
SJU8:20 amSan Juan Luis Munoz Marin Intl
11h 30m
2 stops
RSW7:50 pmFort Myers SW Florida Intl
$321
Southwest
Sep 24
RSW5:05 pmFort Myers SW Florida Intl
6h 45m
1 stop
SJU11:50 pmSan Juan Luis Munoz Marin Intl
Sep 30
SJU8:20 amSan Juan Luis Munoz Marin Intl
11h 30m
2 stops
RSW7:50 pmFort Myers SW Florida Intl
$326

momondo Fare Finder

 
Customize your flight search to find flights from Fort Myers to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, momondo users made 832,500 searches. Data last updated May 27, 2026.
Use the filters below to find and compare flights from Fort Myers to San Juan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Fri 9/25

12:45 pm-11:50 pm

1 stop11h 05m

San Juan Luis Munoz Marin Intl

Sun 9/27

1:59 am-11:50 am

1 stop9h 51m

$310

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Wed 8/26

7:10 am-6:10 pm

2 stops11h 00m

San Juan Luis Munoz Marin Intl

Tue 9/1

8:20 am-7:50 pm

2 stops11h 30m

$316

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Wed 8/5

8:45 am-6:10 pm

2 stops9h 25m

San Juan Luis Munoz Marin Intl

Wed 8/12

8:20 am-7:50 pm

2 stops11h 30m

$321

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Thu 9/24

5:05 pm-11:50 pm

1 stop6h 45m

San Juan Luis Munoz Marin Intl

Wed 9/30

8:20 am-7:50 pm

2 stops11h 30m

$326

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Tue 7/28

7:35 am-7:45 pm

1 stop12h 10m

San Juan Luis Munoz Marin Intl

Tue 8/4

5:15 am-5:00 pm

2 stops11h 45m

$343

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Mon 8/17

7:05 am-4:55 pm

2 stops9h 50m

San Juan Luis Munoz Marin Intl

Thu 8/20

10:00 am-8:10 pm

2 stops10h 10m

$348

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Tue 6/9

8:28 pm-3:55 pm

1 stop19h 27m

San Juan Luis Munoz Marin Intl

Sat 6/13

6:45 pm-7:21 pm

1 stop24h 36m

$357

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Sun 6/7

8:01 pm-4:01 am

1 stop8h 00m

San Juan Luis Munoz Marin Intl

Thu 6/11

6:44 am-7:21 pm

1 stop12h 37m

$366

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Tue 7/28

11:25 am-10:05 pm

2 stops10h 40m

San Juan Luis Munoz Marin Intl

Tue 8/4

5:15 am-5:00 pm

2 stops11h 45m

$370
Quickest round-trip

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Thu 9/24

5:05 pm-11:50 pm

1 stop6h 45m

San Juan Luis Munoz Marin Intl

Wed 9/30

5:15 am-11:35 am

1 stop6h 20m

$371

Flights are sorted by cheapest round-trip flights first.

Showing 1-10 of 20 resultsSorted by cheapest first
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See travel insights to San Juan from

How to get the cheapest flight ticket from Fort Myers to San Juan

Look no further. We've gone through all the searches for this route on momondo so you have the important information and insights to find the cheapest flight ticket for your trip

What is the typical price of a round-trip flight between Fort Myers and San Juan?

What is the cheapest month to fly to San Juan?

If you’re not able to fly to San Juan in February, then January is your next best option. Flight prices from Fort Myers to San Juan during January average around $151.

Cheap Fort Myers to San Juan flight deals and tips

Find info about flight duration, direct flights, and airports for your flight from Fort Myers to San Juan

Fastest flight time

5h 00m

Direct flights

None
The fastest flight from Fort Myers to San Juan takes 5h 00m
There are no direct flights from Fort Myers to San Juan. There are no popular flight routes from Fort Myers to San Juan.
Search flight deals

Frequently asked questions about flying from Fort Myers to San Juan

  • How far is Fort Myers SW Florida Intl to San Juan by plane?

    The distance between Fort Myers SW Florida Intl and San Juan is about 1151.3 mi. Typically, this will take 5h 00m by plane in normal conditions.

  • When did momondo last update prices for flights from Fort Myers SW Florida Intl Airport to San Juan?

    Prices for flights from Fort Myers SW Florida Intl Airport to San Juan are updated daily.

  • How many operators does momondo search for flights from Fort Myers SW Florida Intl Airport to San Juan?

  • How old do you have to be to fly from Fort Myers SW Florida Intl Airport to San Juan?

    The minimum age a child must be to fly alone is five but airlines that offer an unaccompanied minor (UNMR) service will have their own age restrictions, including rules around flight length, timings, and stopovers. We always recommend checking with the individual airline you are booking with to travel from Fort Myers SW Florida Intl Airport to San Juan.

  • What documentation or ID do you need to fly to San Juan?

    The travel and health documents required for your trip to San Juan can vary based on your itinerary and personal situation. As a rule, consider having multiple documents such as a national ID card or driver’s license, and a passport valid for six-months after you plan to arrive at San Juan. We always recommend checking with your airline or a trusted third party such as IATA to get advice.

Best airlines flying from Fort Myers to San Juan

Compare and see reviews for airlines that fly from Fort Myers to San Juan with momondo
Airline
Rating
Free Cancellation
Price
FrontierPriceFrom $168Free CancellationRating
5.6
2,932 reviews
Search Frontier flights
DeltaPriceFrom $245Free CancellationRating
7.9
8,424 reviews
Search Delta flights
SouthwestPriceFrom $333Free CancellationRating
7.9
4,265 reviews
Search Southwest flights
American AirlinesPriceFrom $365Free CancellationRating
7.1
11,640 reviews
Search American Airlines flights

Why use momondo?

Why should I use momondo to find a flight deal from Fort Myers to San Juan?

It is quick and easy to find Fort Myers to San Juan flights on momondo. We search and return numerous flight options from various airlines and agents. You can then use our filters to narrow your search until you have found the most convenient flight to San Juan that suits you.

Can I find flights from Fort Myers to San Juan with flexible booking policies on momondo?

Flights from Fort Myers to San Juan with flexible booking policies can be found by using the search form above and then selecting our dedicated flexible booking filter, which will highlight only the flights where this policy is applied.

How can momondo help me find flights from Fort Myers to San Juan?

momondo helps you find the best flight between Fort Myers and San Juan by providing filters to narrow your choice of flights to those matching your criteria. You can select flights based on numerous factors such as price, departure and landing times, airport and airline.

I’m not ready to book a flight from Fort Myers to San Juan right now. Can momondo alert me if prices change?

If you are simply researching potential flights to San Juan, momondo offers a useful price alert feature which will track prices for flights to San Juan from Fort Myers and alert you when they change.

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Fri 6/26
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Find better results for your trip to Puerto Rico

Fly into one of these airports located in San Juan

Airports listed have a maximum distance of 7.1 mi from San Juan
San Juan Isla Grande Airport
San Juan Luis Munoz Marin Intl Airport