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Cheap flights from Fort Myers to San Juan from $163

This is the cheapest one-way flight price found by a momondo user in the last 72 hours by searching for a flight from Fort Myers to San Juan departing on 7/20. Fares may change, and may not be available for all flights or travel dates. Click the price to refresh the search for this deal.
1 adult
0 bags

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Find the cheapest flights from Fort Myers to San Juan

Cheap round-trip flights

Enter your travel dates to find the best prices.
Frontier Logo
8:16 pm - 3:58 am
RSW
-
SJU
7h 42m
1 stop
Frontier Logo
6:45 pm - 7:21 pm
SJU
-
RSW
24h 36m
1 stop
$313Frontier
Thu, Aug 6 - Mon, Aug 10
Southwest Logo
7:20 am - 4:55 pm
RSW
-
SJU
9h 35m
1 stop
Southwest Logo
8:20 am - 7:50 pm
SJU
-
RSW
11h 30m
2 stops
$316Southwest
Mon, Aug 24 - Tue, Sep 1
Southwest Logo
10:15 am - 10:50 pm
RSW
-
SJU
12h 35m
1 stop
Southwest Logo
1:45 pm - 7:50 pm
SJU
-
RSW
6h 05m
1 stop
$321Southwest
Mon, Aug 24 - Tue, Sep 1
Delta Logo
5:23 am - 1:42 pm
RSW
-
SJU
8h 19m
1 stop
Delta Logo
1:06 pm - 12:36 am
SJU
-
RSW
11h 30m
1 stop
$326Delta
Mon, Aug 24 - Tue, Sep 1
Multiple Airlines Logo
8:16 pm - 3:58 am
RSW
-
SJU
7h 42m
1 stop
Multiple Airlines Logo
3:10 pm - 11:59 pm
SJU
-
RSW
8h 49m
1 stop
$330Multiple Airlines
Tue, Jul 21 - Wed, Jul 29
Southwest Logo
7:20 am - 4:55 pm
RSW
-
SJU
9h 35m
1 stop
Southwest Logo
5:15 am - 11:35 am
SJU
-
RSW
6h 20m
1 stop
$343Southwest
Thu, Aug 20 - Tue, Aug 25
Southwest Logo
6:25 am - 6:15 pm
RSW
-
SJU
11h 50m
2 stops
Southwest Logo
6:00 am - 5:45 pm
SJU
-
RSW
11h 45m
2 stops
$348Southwest
Sat, Aug 22 - Mon, Aug 24
Southwest Logo
3:30 pm - 12:35 am
RSW
-
SJU
9h 05m
1 stop
Southwest Logo
5:00 am - 2:50 pm
SJU
-
RSW
9h 50m
2 stops
$357Southwest
Fri, Oct 2 - Mon, Oct 5
Frontier Logo
12:45 pm - 11:50 pm
RSW
-
SJU
11h 05m
1 stop
Frontier Logo
1:59 am - 11:50 am
SJU
-
RSW
9h 51m
1 stop
$361Frontier
Fri, Sep 25 - Sun, Sep 27
Southwest Logo
2:05 pm - 12:15 am
RSW
-
SJU
10h 10m
1 stop
Southwest Logo
8:20 am - 7:50 pm
SJU
-
RSW
11h 30m
2 stops
$362Southwest
Mon, Jul 27 - Tue, Aug 4

American Airlines flights from Fort Myers to San Juan

Our best American Airlines deals on Fort Myers to San Juan flight tickets
American Airlines
Sep 10
RSW5:44 pmFort Myers SW Florida Intl
17h 26m
2 stops
SJU11:10 amSan Juan Luis Munoz Marin Intl
Sep 21
SJU7:05 pmSan Juan Luis Munoz Marin Intl
19h 52m
2 stops
RSW2:57 pmFort Myers SW Florida Intl
$436
American Airlines
Sep 10
RSW5:44 pmFort Myers SW Florida Intl
17h 26m
2 stops
SJU11:10 amSan Juan Luis Munoz Marin Intl
Sep 21
SJU3:55 pmSan Juan Luis Munoz Marin Intl
17h 06m
1 stop
RSW9:01 amFort Myers SW Florida Intl
$456
American Airlines
Jul 3
RSW6:21 amFort Myers SW Florida Intl
16h 38m
1 stop
SJU10:59 pmSan Juan Luis Munoz Marin Intl
Jul 7
SJU7:25 amSan Juan Luis Munoz Marin Intl
7h 44m
1 stop
RSW3:09 pmFort Myers SW Florida Intl
$461

Delta flights from Fort Myers to San Juan

Our best Delta deals on Fort Myers to San Juan flight tickets
Delta
Aug 24
RSW5:23 amFort Myers SW Florida Intl
8h 19m
1 stop
SJU1:42 pmSan Juan Luis Munoz Marin Intl
Sep 1
SJU1:06 pmSan Juan Luis Munoz Marin Intl
11h 30m
1 stop
RSW12:36 amFort Myers SW Florida Intl
$326
Delta
Sep 10
RSW5:35 amFort Myers SW Florida Intl
7h 41m
1 stop
SJU1:16 pmSan Juan Luis Munoz Marin Intl
Sep 21
SJU2:26 pmSan Juan Luis Munoz Marin Intl
10h 10m
1 stop
RSW12:36 amFort Myers SW Florida Intl
$367
Delta
Sep 10
RSW6:50 amFort Myers SW Florida Intl
6h 26m
1 stop
SJU1:16 pmSan Juan Luis Munoz Marin Intl
Sep 21
SJU2:26 pmSan Juan Luis Munoz Marin Intl
10h 10m
1 stop
RSW12:36 amFort Myers SW Florida Intl
$408

momondo Fare Finder

 
Customize your flight search to find flights from Fort Myers to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, momondo users made 832,500 searches. Data last updated May 12, 2026.
Use the filters below to find and compare flights from Fort Myers to San Juan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Thu 8/6

8:16 pm-3:58 am

1 stop7h 42m

San Juan Luis Munoz Marin Intl

Mon 8/10

6:45 pm-7:21 pm

1 stop24h 36m

$313

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Mon 8/24

7:20 am-4:55 pm

1 stop9h 35m

San Juan Luis Munoz Marin Intl

Tue 9/1

8:20 am-7:50 pm

2 stops11h 30m

$316

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Mon 8/24

10:15 am-10:50 pm

1 stop12h 35m

San Juan Luis Munoz Marin Intl

Tue 9/1

1:45 pm-7:50 pm

1 stop6h 05m

$321

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Mon 8/24

5:23 am-1:42 pm

1 stop8h 19m

San Juan Luis Munoz Marin Intl

Tue 9/1

1:06 pm-12:36 am

1 stop11h 30m

$326

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Tue 7/21

8:16 pm-3:58 am

1 stop7h 42m

San Juan Luis Munoz Marin Intl

Wed 7/29

3:10 pm-11:59 pm

1 stop8h 49m

$330
Quickest round-trip

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Thu 8/20

7:20 am-4:55 pm

1 stop9h 35m

San Juan Luis Munoz Marin Intl

Tue 8/25

5:15 am-11:35 am

1 stop6h 20m

$343

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Sat 8/22

6:25 am-6:15 pm

2 stops11h 50m

San Juan Luis Munoz Marin Intl

Mon 8/24

6:00 am-5:45 pm

2 stops11h 45m

$348

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Fri 10/2

3:30 pm-12:35 am

1 stop9h 05m

San Juan Luis Munoz Marin Intl

Mon 10/5

5:00 am-2:50 pm

2 stops9h 50m

$357

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Fri 9/25

12:45 pm-11:50 pm

1 stop11h 05m

San Juan Luis Munoz Marin Intl

Sun 9/27

1:59 am-11:50 am

1 stop9h 51m

$361

Fort MyersSan Juan

RSW - SJU

RSWSJU

Fort Myers SW Florida Intl

Mon 7/27

2:05 pm-12:15 am

1 stop10h 10m

San Juan Luis Munoz Marin Intl

Tue 8/4

8:20 am-7:50 pm

2 stops11h 30m

$362

Flights are sorted by cheapest round-trip flights first.

Showing 1-10 of 20 resultsSorted by cheapest first
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See travel insights to San Juan from

How to get the cheapest flight ticket from Fort Myers to San Juan

Look no further. We've gone through all the searches for this route on momondo so you have the important information and insights to find the cheapest flight ticket for your trip

What is the typical price of a round-trip flight between Fort Myers and San Juan?

What is the cheapest month to fly to San Juan?

If you’re not able to fly to San Juan in February, then June is your next best option. Flight prices from Fort Myers to San Juan during June average around $149.

Cheap Fort Myers to San Juan flight deals and tips

Find info about flight duration, direct flights, and airports for your flight from Fort Myers to San Juan

Fastest flight time

6h 01m

Direct flights

None
The fastest flight from Fort Myers to San Juan takes 6h 01m
There are no direct flights from Fort Myers to San Juan. There are no popular flight routes from Fort Myers to San Juan.
Search flight deals

Frequently asked questions about flying from Fort Myers to San Juan

  • How far is Fort Myers SW Florida Intl to San Juan by plane?

    The distance between Fort Myers SW Florida Intl and San Juan is about 1151.3 mi. Typically, this will take 6h 01m by plane in normal conditions.

  • When did momondo last update prices for flights from Fort Myers SW Florida Intl Airport to San Juan?

    Prices for flights from Fort Myers SW Florida Intl Airport to San Juan are updated daily.

  • How many operators does momondo search for flights from Fort Myers SW Florida Intl Airport to San Juan?

  • How old do you have to be to fly from Fort Myers SW Florida Intl Airport to San Juan?

    The minimum age a child must be to fly alone is five but airlines that offer an unaccompanied minor (UNMR) service will have their own age restrictions, including rules around flight length, timings, and stopovers. We always recommend checking with the individual airline you are booking with to travel from Fort Myers SW Florida Intl Airport to San Juan.

  • What documentation or ID do you need to fly to San Juan?

    The travel and health documents required for your trip to San Juan can vary based on your itinerary and personal situation. As a rule, consider having multiple documents such as a national ID card or driver’s license, and a passport valid for six-months after you plan to arrive at San Juan. We always recommend checking with your airline or a trusted third party such as IATA to get advice.

Best airlines flying from Fort Myers to San Juan

Compare and see reviews for airlines that fly from Fort Myers to San Juan with momondo
Airline
Rating
Free Cancellation
Price
FrontierPriceFrom $168Free CancellationRating
5.6
2,952 reviews
Search Frontier flights
DeltaPriceFrom $245Free CancellationRating
7.9
8,447 reviews
Search Delta flights
SouthwestPriceFrom $333Free CancellationRating
8.0
4,295 reviews
Search Southwest flights
American AirlinesPriceFrom $365Free CancellationRating
7.1
11,661 reviews
Search American Airlines flights

Why use momondo?

Why should I use momondo to find a flight deal from Fort Myers to San Juan?

It is quick and easy to find Fort Myers to San Juan flights on momondo. We search and return numerous flight options from various airlines and agents. You can then use our filters to narrow your search until you have found the most convenient flight to San Juan that suits you.

Can I find flights from Fort Myers to San Juan with flexible booking policies on momondo?

Flights from Fort Myers to San Juan with flexible booking policies can be found by using the search form above and then selecting our dedicated flexible booking filter, which will highlight only the flights where this policy is applied.

How can momondo help me find flights from Fort Myers to San Juan?

momondo helps you find the best flight between Fort Myers and San Juan by providing filters to narrow your choice of flights to those matching your criteria. You can select flights based on numerous factors such as price, departure and landing times, airport and airline.

I’m not ready to book a flight from Fort Myers to San Juan right now. Can momondo alert me if prices change?

If you are simply researching potential flights to San Juan, momondo offers a useful price alert feature which will track prices for flights to San Juan from Fort Myers and alert you when they change.

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Find better results for your trip to Puerto Rico

Fly into one of these airports located in San Juan

Airports listed have a maximum distance of 7.1 mi from San Juan
San Juan Isla Grande Airport
San Juan Luis Munoz Marin Intl Airport