Cheap flights from San Juan to New York from $126

The month of October is, on average, the cheapest month to fly to New York John F Kennedy Intl Airport from San Juan, with most prices found around $193. If you don’t want to visit New York John F Kennedy Intl Airport in October, then you should wait until February to fly from San Juan, when ticket prices are also cheap, with an average price of $212.

Our data shows that Friday is the least expensive day to fly to New York John F Kennedy Intl Airport. Tickets to fly out on this day can be as low as $259. The most expensive day to fly to New York John F Kennedy Intl Airport is Sunday, with ticket prices averaging around $357.

According to our data, the cheapest time of day to fly to New York John F Kennedy Intl Airport is in the evening. momondo users have found flights departing from San Juan to New York John F Kennedy Intl Airport in the evening for as low as $244. Keep in mind that these prices may fluctuate based on what airline you choose and the time of year you plan to travel. Flights at noon are often more expensive with an average ticket price of $433.

Fly from San Juan Luis Munoz Marin Intl to New York John F Kennedy Intl for the best San Juan - New York John F Kennedy Intl flight prices

You are more likely to see cheaper flights to New York John F Kennedy Intl Airport from San Juan when booking weeks ahead of your departure date. In general, you can expect to find flights to New York John F Kennedy Intl Airport for around $265 when searching weeks out. However, flight prices might be lower outside of this timeframe. For example, people recently found flights to New York John F Kennedy Intl Airport from San Juan for as low as $239 on momondo.

There are 4 cabin classes available to choose from on San Juan to New York John F Kennedy Intl Airport flights. Cabin price and availability will vary by airline so perform a search above to find the right deals for you.

Delta is the most popular carrier operating from San Juan to New York John F Kennedy Intl

JetBlue, Frontier and Delta are the top three most popular airlines that fly to New York John F Kennedy Intl Airport from San Juan according to our data. JetBlue is the first choice among our users, with 50% of people opting to fly with this airline when traveling to New York John F Kennedy Intl Airport. Keep in mind that there are 4 different airlines that fly to New York John F Kennedy Intl Airport on a routine basis, so you have a few additional options to choose from.

Historically, on average around 14% of flights between San Juan and New York have experienced a delay on any given week. The average delay length over the past 12 months has been 170 minutes.

Generally, flights departing in the morning tend to experience fewer delays. Flights in the evening have, in the past, seen delays more frequently in comparison.

Wednesday is statistically the day of the week which experiences the fewest number of delays on this flight route. Sunday has historically seen more delays on average compared to the rest of the week.

According to our data, Delta have had the least number of delays on this route over the last 12 months; with about 7% of their flights experiencing any sort of delay.

The number of flights available between San Juan and New York John F Kennedy Intl Airport is 38 per day as of May 2026. The most frequent departure time is 1:00PM, with 58% of daily flights leaving in the afternoon.

As of May 2026, there are 268 flights per week flying from San Juan to New York John F Kennedy Intl Airport. The most common day of the week flights depart is Fri, with 17% of flights taking off on this day.