Cheap flights from Manila to Tokyo from $142

The month of September is, on average, the cheapest month to fly to Tokyo Narita Airport from Manila, with most prices found around $166. If you are unable to visit Tokyo Narita Airport during the month of September, then departing from Manila during the month July is also very affordable. Most momondo users find prices during this month for around $179.

On average, the least expensive day to fly to Tokyo Narita Airport from Manila is on a Sunday. momondo users have found tickets for Sunday departures for as low as $242. However, this price may fluctuate depending on the airline, the season, and holidays. If your travel schedule is flexible, try to avoid departing on a Tuesday because tickets tend to average around $294. These prices are subject to change though, so be sure to set up a Price Alert for flights to Tokyo Narita Airport.

In the evening is the cheapest time of day to fly from Manila to Tokyo Narita Airport when you can find flight prices for as low as $195. Flying to Tokyo Narita Airport in the evening is an ideal time because this is during off-peak travel hours. Try not to purchase tickets in the morning because they tend to be around $320. Of course, these prices can vary depending on the time of year and what airport you fly to.

Fly from Manila Ninoy Aquino Intl to Tokyo Narita for the best Manila Ninoy Aquino Intl - Tokyo Narita flight prices

You are more likely to see cheaper flights to Tokyo Narita Airport from Manila when booking weeks ahead of your departure date. In general, you can expect to find flights to Tokyo Narita Airport for around $215 when searching weeks out. However, flight prices might be lower outside of this timeframe. For example, people recently found flights to Tokyo Narita Airport from Manila for as low as $180 on momondo.

Jetstar Japan, Philippine Airlines, and Jeju Air are the most popular carriers operating from Manila Ninoy Aquino Intl to Tokyo Narita

Cebu Pacific, Philippines AirAsia and Philippine Airlines are the top three most popular airlines that fly to Tokyo Narita Airport from Manila according to our data. Cebu Pacific is the first choice among our users, with 40% of people opting to fly with this airline when traveling to Tokyo Narita Airport. Keep in mind that there are 8 different airlines that fly to Tokyo Narita Airport on a routine basis, so you have a few additional options to choose from.

Historically, on average around 11% of flights between Manila and Tokyo have experienced a delay on any given week. The average delay length over the past 12 months has been 139 minutes.

Generally, flights departing in the morning tend to experience fewer delays. Flights at night have, in the past, seen delays more frequently in comparison.

Thursday is statistically the day of the week which experiences the fewest number of delays on this flight route. Wednesday has historically seen more delays on average compared to the rest of the week.

According to our data, ANA have had the least number of delays on this route over the last 12 months; with about 3% of their flights experiencing any sort of delay.

Hong Kong (HKG) was the most common stop: 50% of momondo users choosing 1-stop flights on this route connected there.

Flights via Cebu City (CEB) offer the lowest average round-trip price of $360.

Flights connecting via Cebu City (CEB) have the shortest average one-way travel time: 8h 15m.

Cebu City (CEB) has the shortest average layover time for this route: 3h 08m.

As of April 2026, there are 13 flights per day flying from Manila to Tokyo Narita Airport. The most common time of day flights depart is 7:00AM, with 62% of flights taking off at noon.

93 flights are operational weekly from Manila to Tokyo Narita Airport as of April 2026. The most popular departure day for this route is Mon, with 15% of flights per week taking off on this day.