Cheap flights from Manila to Tokyo from $166

In general, September is the cheapest month to fly from Manila to Tokyo Haneda Airport. Due to it being the ‘off-season’ during this time, you can expect flight prices to be around $354. The month of August is another great option to travel to Tokyo Haneda Airport, with average flight prices from Manila averaging around $365.

According to our data, Tuesday is the cheapest day to fly to Tokyo Haneda Airport from Manila. The lowest ticket price found for a Tuesday departure recently was $468. Keep in mind that prices can always vary depending on your route and whether or not you are flying domestic or international. The most expensive day to fly to Tokyo Haneda Airport is Wednesday, with ticket prices averaging around $548.

Our data shows that the cheapest Manila to Tokyo Haneda Airport flights are usually those with departure times in the morning. Our users have found flights to Tokyo Haneda Airport in the morning for as low as $454. If you have a flexible travel schedule, then try to avoid flying at noon when prices are $600 on average. Flights to Tokyo Haneda Airport from Manila at noon are generally more expensive because this time of day is more convenient for travelers’ schedules.

Fly from Manila Ninoy Aquino Intl to Tokyo Haneda for the best Manila Ninoy Aquino Intl - Tokyo Haneda flight prices

You are more likely to see cheaper flights to Tokyo Haneda Airport from Manila when booking weeks ahead of your departure date. In general, you can expect to find flights to Tokyo Haneda Airport for around $403 when searching weeks out. However, flight prices might be lower outside of this timeframe. For example, people recently found flights to Tokyo Haneda Airport from Manila for as low as $319 on momondo.

There are 3 cabin classes available to choose from on Manila to Tokyo Haneda Airport flights. Cabin price and availability will vary by airline so perform a search above to find the right deals for you.

Philippine Airlines is the most popular carrier operating from Manila Ninoy Aquino Intl to Tokyo Haneda

Philippine Airlines, ANA and Japan Airlines are the top three most popular airlines that fly to Tokyo Haneda Airport from Manila according to our data. Philippine Airlines is the first choice among our users, with 61% of people opting to fly with this airline when traveling to Tokyo Haneda Airport. Keep in mind that there are 5 different airlines that fly to Tokyo Haneda Airport on a routine basis, so you have a few additional options to choose from.

Historically, on average around 8% of flights between Manila and Tokyo have experienced a delay on any given week. The average delay length over the past 12 months has been 109 minutes.

Generally, flights departing in the evening tend to experience fewer delays. Flights in the early afternoon have, in the past, seen delays more frequently in comparison.

Monday is statistically the day of the week which experiences the fewest number of delays on this flight route. Friday has historically seen more delays on average compared to the rest of the week.

According to our data, Philippine Airlines have had the least number of delays on this route over the last 12 months; with about 7% of their flights experiencing any sort of delay.

Hong Kong (HKG) was the most common stop: 83% of momondo users choosing 1-stop flights on this route connected there.

Flights via Hong Kong (HKG) offer the lowest average round-trip price of $381.

Flights connecting via Hong Kong (HKG) have the shortest average one-way travel time: 7h 50m.

Hong Kong (HKG) has the shortest average layover time for this route: 1h 52m.

As of September 2026, 8 flights take off from Manila and land in Tokyo Haneda Airport each day. The most common flight departure time for this route is 7:00PM, with 46% of daily flights taking off in the evening.

As of September 2026, there are 56 flights per week flying from Manila to Tokyo Haneda Airport. The most common day of the week flights depart is Fri, with 18% of flights taking off on this day.